RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 C4orf17Q53FE4 359 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 PPP4R3BQ5MIZ7 849 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 MAMDC4Q6UXC1 1216 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 DEFB128Q7Z7B8 93 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 SIX5Q8N196 739 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 C12orf50Q8NA57 414 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 LRIG1Q96JA1 1093 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 PAGR1Q9BTK6 254 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 BCO2Q9BYV7 579 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 PRORYQ9H606 182 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 BABAM1Q9NWV8 329 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 NXF1Q9UBU9 619 aaKnown RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 PCDHGA5Q9Y5G8 931 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 DENND4AQ7Z401 1863 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 E9PAM4 449 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 ERVH48-1M5A8F1 160 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 ARHGAP33O14559 1287 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 LINC01565O15544 149 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 COBLO75128 1261 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 SLC25A27O95847 323 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 PRB1P04280 392 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 BMPR1AP36894 532 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 CTSWP56202 376 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 UBE3AQ05086 875 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 HNRNPDQ14103 355 aaKnown RBP4.46□□□□□ -1.69
CCDC7-213ENST00000639290 DSG2Q14126 1118 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 SCN5AQ14524 2016 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 DAB2IPQ5VWQ8 1189 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 ANKRD54Q6NXT1 300 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 RUFY4Q6ZNE9 571 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 KRI1Q8N9T8 703 aaKnown RBP4.46□□□□□ -1.69
CCDC7-213ENST00000639290 CCDC191Q8NCU4 936 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 GPR20Q99678 358 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 PI4K2AQ9BTU6 479 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 SMOC2Q9H3U7 446 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 TBC1D17Q9HA65 648 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 HECTD1Q9ULT8 2610 aa4.46□□□□□ -1.69
CCDC7-213ENST00000639290 SPTA1P02549 2419 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 SPEGQ15772 3267 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 FBN2P35556 2912 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 A6NJR5 290 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 C2CD4DB7Z1M9 353 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 GLP2RO95838 553 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 CCDC6Q16204 474 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 FAM43BQ6ZT52 329 aaPredicted RBP4.46□□□□□ -1.7
CCDC7-213ENST00000639290 PI4K2BQ8TCG2 481 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 CLP1Q92989 425 aaKnown RBP4.46□□□□□ -1.7
CCDC7-213ENST00000639290 L3MBTL2Q969R5 705 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 POM121Q96HA1 1249 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 CYP26B1Q9NR63 512 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 USP40Q9NVE5 1235 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 IL17BQ9UHF5 180 aa4.46□□□□□ -1.7
CCDC7-213ENST00000639290 TICRRQ7Z2Z1 1910 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 SPTBN2O15020 2390 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 UPK3BL1B0FP48 263 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 UPK3BL2E5RIL1 263 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 C6orf222P0C671 652 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-213ENST00000639290 RPS9P46781 194 aaKnown RBP4.45□□□□□ -1.7
CCDC7-213ENST00000639290 STARD6P59095 220 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 DEFB103AP81534 67 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 PDE4DQ08499 809 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 ZNF792Q3KQV3 632 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 RAB44Q7Z6P3 723 aaPredicted RBP4.45□□□□□ -1.7
CCDC7-213ENST00000639290 TICAM1Q8IUC6 712 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 RGS22Q8NE09 1264 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 PJA1Q8NG27 643 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 MYO15AQ9UKN7 3530 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 MICAL3Q7RTP6 2002 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 ITPR1Q14643 2758 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 CLEC18AA5D8T8 446 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 USP17L10C9JJH3 530 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 TRAK2O60296 914 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 ASNSP08243 561 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 HMGB1P09429 215 aaKnown RBP4.45□□□□□ -1.7
CCDC7-213ENST00000639290 KLRK1P26718 216 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 PDE4AP27815 886 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 CAP2P40123 477 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 USP14P54578 494 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 ZNF423Q2M1K9 1284 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 GNASQ5JWF2 1037 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 PRAMEF19Q5SWL8 479 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 CLEC18BQ6UXF7 455 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 RASGRP2Q7LDG7 609 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 CLEC18CQ8NCF0 446 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 MYL10Q9BUA6 226 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 MKNK1Q9BUB5 465 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 TRPV6Q9H1D0 765 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 POLR3EQ9NVU0 708 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 FAM198AQ9UFP1 575 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 MIA3Q5JRA6 1907 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 EMSYQ7Z589 1322 aa4.45□□□□□ -1.7
CCDC7-213ENST00000639290 TRIM66O15016 1216 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 CTAGE5O15320 804 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 FCER1AP12319 257 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 CACNB3P54284 484 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 DUSP6Q16828 381 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 EML3Q32P44 896 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 WDR78Q5VTH9 848 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
CCDC7-213ENST00000639290 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms