RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 PDE4DQ08499 809 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 SLC39A5Q6ZMH5 540 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 EEPD1Q7L9B9 569 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 PXMP2Q9NR77 195 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 DNAH12Q6ZR08 3092 aa20.67■□□□□ 0.9
SPIN3-220ENST00000639257 A0A1W2PQ45 241 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-220ENST00000639257 A0A1W2PQY0 241 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 CDC27P30260 824 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 ACLYP53396 1101 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 RTN1Q16799 776 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 CCDC62Q6P9F0 684 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 TLK2Q86UE8 772 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 BRF1Q92994 677 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 PDCD2LQ9BRP1 358 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 KIAA1217Q5T5P2 1943 aa20.66■□□□□ 0.9
SPIN3-220ENST00000639257 GCOM1H8Y6P7 765 aaPredicted RBP20.65■□□□□ 0.9
SPIN3-220ENST00000639257 C6orf222P0C671 652 aaPredicted RBP20.65■□□□□ 0.9
SPIN3-220ENST00000639257 POLR2MP0CAP2 368 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 ANAPC15P60006 121 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 KCNA10Q16322 511 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 PCSK9Q8NBP7 692 aaKnown RBP20.65■□□□□ 0.9
SPIN3-220ENST00000639257 WDR11Q9BZH6 1224 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
SPIN3-220ENST00000639257 SEC63Q9UGP8 760 aaKnown RBP20.65■□□□□ 0.9
SPIN3-220ENST00000639257 ELP1O95163 1332 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 GOLGA8AA7E2F4 631 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 MEIS2O14770 477 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 NKRFO15226 690 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPIN3-220ENST00000639257 NR3C2P08235 984 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 PTGS1P23219 599 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 HOXA13P31271 388 aaPredicted RBP20.64■□□□□ 0.89
SPIN3-220ENST00000639257 TOB2Q14106 344 aaPredicted RBP20.64■□□□□ 0.89
SPIN3-220ENST00000639257 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 C7orf61Q8IZ16 206 aa20.64■□□□□ 0.89
SPIN3-220ENST00000639257 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
SPIN3-220ENST00000639257 ARIH2O95376 493 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 ASGR1P07306 291 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 RTP1P59025 263 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 PGM5Q15124 567 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 STXBP2Q15833 593 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 ARHGEF16Q5VV41 709 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 VSIG10LQ86VR7 867 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 PIBF1Q8WXW3 757 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 FERMT2Q96AC1 680 aa20.63■□□□□ 0.89
SPIN3-220ENST00000639257 RANBP2P49792 3224 aaKnown RBP20.63■□□□□ 0.89
SPIN3-220ENST00000639257 EIF5BO60841 1220 aaKnown RBP20.62■□□□□ 0.89
SPIN3-220ENST00000639257 RGS20O76081 388 aa20.62■□□□□ 0.89
SPIN3-220ENST00000639257 EIF2AK2P19525 551 aaKnown RBP20.62■□□□□ 0.89
SPIN3-220ENST00000639257 METAP2P50579 478 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPIN3-220ENST00000639257 ATN1P54259 1190 aaPredicted RBP20.62■□□□□ 0.89
SPIN3-220ENST00000639257 NTRK3Q16288 839 aa20.62■□□□□ 0.89
SPIN3-220ENST00000639257 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
SPIN3-220ENST00000639257 GNASQ5JWF2 1037 aa20.62■□□□□ 0.89
SPIN3-220ENST00000639257 IL31RAQ8NI17 732 aa20.62■□□□□ 0.89
SPIN3-220ENST00000639257 CYP46A1Q9Y6A2 500 aa20.62■□□□□ 0.89
SPIN3-220ENST00000639257 CCDC196A0A1B0GTZ2 297 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 hCG_1642624A0A1W2PR95 340 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 hCG_1984214I3L0E3 225 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 DYNC1LI2O43237 492 aaPredicted RBP20.61■□□□□ 0.89
SPIN3-220ENST00000639257 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
SPIN3-220ENST00000639257 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
SPIN3-220ENST00000639257 CDK7P50613 346 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 FGD1P98174 961 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 BEX3Q00994 111 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 TTLL4Q14679 1199 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 TYW1BQ6NUM6 668 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 ANKRD33Q7Z3H0 272 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 CCDC82Q8N4S0 544 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 ZNF713Q8N859 430 aaPredicted RBP20.61■□□□□ 0.89
SPIN3-220ENST00000639257 SLC43A3Q8NBI5 491 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 GDF15Q99988 308 aa20.61■□□□□ 0.89
SPIN3-220ENST00000639257 ALDH8A1Q9H2A2 487 aaPredicted RBP20.61■□□□□ 0.89
SPIN3-220ENST00000639257 A6NJR5 290 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 PDIA3P30101 505 aaKnown RBP20.6■□□□□ 0.89
SPIN3-220ENST00000639257 TRIM60Q495X7 471 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 PPP1R18Q6NYC8 613 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 USP17L6PQ6QN14 398 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 TOX2Q96NM4 488 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 UPF3BQ9BZI7 483 aaKnown RBP20.6■□□□□ 0.89
SPIN3-220ENST00000639257 AP5M1Q9H0R1 490 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 STARD7Q9NQZ5 370 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 DDX41Q9UJV9 622 aaKnown RBP20.6■□□□□ 0.89
SPIN3-220ENST00000639257 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
SPIN3-220ENST00000639257 CABYRO75952 493 aa20.59■□□□□ 0.89
SPIN3-220ENST00000639257 SEC24BO95487 1268 aa20.59■□□□□ 0.89
SPIN3-220ENST00000639257 TXNP10599 105 aaKnown RBP20.59■□□□□ 0.89
SPIN3-220ENST00000639257 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
SPIN3-220ENST00000639257 EMID1Q96A84 441 aaPredicted RBP20.59■□□□□ 0.89
SPIN3-220ENST00000639257 ZNF274Q96GC6 653 aaPredicted RBP20.59■□□□□ 0.89
SPIN3-220ENST00000639257 GLT1D1Q96MS3 346 aa20.59■□□□□ 0.89
SPIN3-220ENST00000639257 V9GY48 417 aaPredicted RBP20.59■□□□□ 0.89
SPIN3-220ENST00000639257 SCN10AQ9Y5Y9 1956 aa20.59■□□□□ 0.89
SPIN3-220ENST00000639257 STXBP3O00186 592 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 STAM2O75886 525 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms