RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FCHSD1Q86WN1 690 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 NSUN6Q8TEA1 469 aaKnown RBP25.14■■□□□ 1.61
SCN1B-206ENST00000638536 PHKBQ93100 1093 aa25.14■■□□□ 1.61
SCN1B-206ENST00000638536 MEIS2O14770 477 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 PDE4DQ08499 809 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 STK3Q13188 491 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 IL31RAQ8NI17 732 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 C11orf49Q9H6J7 331 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 VTA1Q9NP79 307 aa25.13■■□□□ 1.61
SCN1B-206ENST00000638536 LOC102724159A0A0B4J2E5 919 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 DNM1LO00429 736 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 DUSP11O75319 330 aaKnown RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 AK2P54819 239 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 TNFAIP2Q03169 654 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 PPP2R5BQ15173 497 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 PWP2Q15269 919 aaKnown RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 ARHGEF16Q5VV41 709 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 ZFP91Q96JP5 570 aaPredicted RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 KIF2CQ99661 725 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 MAP3K20Q9NYL2 800 aaKnown RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 TPCN1Q9ULQ1 816 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 GNEQ9Y223 722 aaKnown RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 EIF5BO60841 1220 aaKnown RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 DTNBO60941 627 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 ARRDC4Q8NCT1 418 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 ZNF274Q96GC6 653 aaPredicted RBP25.12■■□□□ 1.61
SCN1B-206ENST00000638536 PDCD2LQ9BRP1 358 aa25.12■■□□□ 1.61
SCN1B-206ENST00000638536 CCDC196A0A1B0GTZ2 297 aa25.11■■□□□ 1.61
SCN1B-206ENST00000638536 CTAGE5O15320 804 aa25.11■■□□□ 1.61
SCN1B-206ENST00000638536 NR3C2P08235 984 aa25.11■■□□□ 1.61
SCN1B-206ENST00000638536 PKN1Q16512 942 aa25.11■■□□□ 1.61
SCN1B-206ENST00000638536 SENP6Q9GZR1 1112 aaPredicted RBP25.11■■□□□ 1.61
SCN1B-206ENST00000638536 ALDH8A1Q9H2A2 487 aaPredicted RBP25.11■■□□□ 1.61
SCN1B-206ENST00000638536 RBM47A0AV96 593 aaKnown RBP25.1■■□□□ 1.61
SCN1B-206ENST00000638536 UBE2SQ16763 222 aa25.1■■□□□ 1.61
SCN1B-206ENST00000638536 SAMD3Q8N6K7 520 aa25.1■■□□□ 1.61
SCN1B-206ENST00000638536 KLHDC9Q8NEP7 349 aa25.1■■□□□ 1.61
SCN1B-206ENST00000638536 IWS1Q96ST2 819 aa25.1■■□□□ 1.61
SCN1B-206ENST00000638536 MYH7BA7E2Y1 1941 aa25.1■■□□□ 1.61
SCN1B-206ENST00000638536 RANBP2P49792 3224 aaKnown RBP25.09■■□□□ 1.61
SCN1B-206ENST00000638536 STXBP3O00186 592 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 ARIH2O95376 493 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 NEK4P51957 841 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 PGM5Q15124 567 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 IQSEC1Q6DN90 963 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 CCSAPQ6IQ19 270 aaPredicted RBP25.09■■□□□ 1.61
SCN1B-206ENST00000638536 NOL8Q76FK4 1167 aaKnown RBP25.09■■□□□ 1.61
SCN1B-206ENST00000638536 FERMT2Q96AC1 680 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 WDR11Q9BZH6 1224 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 PSTPIP2Q9H939 334 aa25.09■■□□□ 1.61
SCN1B-206ENST00000638536 ADAMTS3O15072 1205 aa25.08■■□□□ 1.61
SCN1B-206ENST00000638536 MYCLP12524 364 aaPredicted RBP25.08■■□□□ 1.61
SCN1B-206ENST00000638536 GJA9P57773 515 aa25.08■■□□□ 1.61
SCN1B-206ENST00000638536 DPF3Q92784 378 aa25.08■■□□□ 1.61
SCN1B-206ENST00000638536 COPS5Q92905 334 aa25.08■■□□□ 1.61
SCN1B-206ENST00000638536 UPF3AQ9H1J1 476 aaKnown RBP25.08■■□□□ 1.61
SCN1B-206ENST00000638536 PCDH10Q9P2E7 1040 aa25.08■■□□□ 1.61
SCN1B-206ENST00000638536 PIK3CDO00329 1044 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 PRPF3O43395 683 aaKnown RBP25.08■■□□□ 1.6
SCN1B-206ENST00000638536 RGS20O76081 388 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 LARGE1O95461 756 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 C6orf222P0C671 652 aaPredicted RBP25.08■■□□□ 1.6
SCN1B-206ENST00000638536 IFNAR1P17181 557 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 BEX3Q00994 111 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 SCRN1Q12765 414 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 STXBP2Q15833 593 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 PFKFB3Q16875 520 aaPredicted RBP25.08■■□□□ 1.6
SCN1B-206ENST00000638536 SEPT14Q6ZU15 432 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 RNF180Q86T96 592 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 SMARCC2Q8TAQ2 1214 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 C22orf23Q9BZE7 217 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 BARHL2Q9NY43 387 aa25.08■■□□□ 1.6
SCN1B-206ENST00000638536 KBTBD13C9JR72 458 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 DYNC1LI2O43237 492 aaPredicted RBP25.07■■□□□ 1.6
SCN1B-206ENST00000638536 ATN1P54259 1190 aaPredicted RBP25.07■■□□□ 1.6
SCN1B-206ENST00000638536 NAPAP54920 295 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 LRRC26Q2I0M4 334 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 DUSP28Q4G0W2 176 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 TLK2Q86UE8 772 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 VSIG10LQ86VR7 867 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 MPHOSPH6Q99547 160 aaKnown RBP25.07■■□□□ 1.6
SCN1B-206ENST00000638536 SLC26A6Q9BXS9 759 aa25.07■■□□□ 1.6
SCN1B-206ENST00000638536 SCG2P13521 617 aa25.06■■□□□ 1.6
SCN1B-206ENST00000638536 KCNA10Q16322 511 aa25.06■■□□□ 1.6
SCN1B-206ENST00000638536 HTATIP2Q9BUP3 242 aa25.06■■□□□ 1.6
SCN1B-206ENST00000638536 FRMPD4Q14CM0 1322 aa25.06■■□□□ 1.6
SCN1B-206ENST00000638536 B4DLN1 442 aa25.05■■□□□ 1.6
SCN1B-206ENST00000638536 MRPL12P52815 198 aaKnown RBP25.05■■□□□ 1.6
SCN1B-206ENST00000638536 CCDC62Q6P9F0 684 aa25.05■■□□□ 1.6
SCN1B-206ENST00000638536 CUL5Q93034 780 aa25.05■■□□□ 1.6
SCN1B-206ENST00000638536 PHF24Q9UPV7 400 aa25.05■■□□□ 1.6
SCN1B-206ENST00000638536 EIF3JO75822 258 aaKnown RBP25.04■■□□□ 1.6
SCN1B-206ENST00000638536 MRPS9P82933 396 aaKnown RBP25.04■■□□□ 1.6
SCN1B-206ENST00000638536 ME3Q16798 604 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 LY6KQ17RY6 165 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 SCFD2Q8WU76 684 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 RNF26Q9BY78 433 aaPredicted RBP25.04■■□□□ 1.6
SCN1B-206ENST00000638536 DOCK5Q9H7D0 1870 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 SMCO2A6NFE2 343 aa25.04■■□□□ 1.6
SCN1B-206ENST00000638536 TXNP10599 105 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms