RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 CNTNAP4Q9C0A0 1308 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 ITGB3BPQ13352 177 aaPredicted RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 TBC1D25Q3MII6 688 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 SLC30A9Q6PML9 568 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 SLC51AQ86UW1 340 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 KLHL23Q8NBE8 558 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 STAMBPL1Q96FJ0 436 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 NARFQ9UHQ1 456 aa13.42□□□□□ -0.26
GFAP-228ENST00000638488 DMGDHQ9UI17 866 aaKnown RBP13.42□□□□□ -0.26
GFAP-228ENST00000638488 ZNF233A6NK53 670 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 COQ9O75208 318 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 RPS6KA4O75676 772 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 KRT14P02533 472 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 PRLRP16471 622 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 CUL4BQ13620 913 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 ALX1Q15699 326 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 RPUSD2Q8IZ73 545 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 CACNA2D3Q8IZS8 1091 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 LRRC1Q9BTT6 524 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 SLC26A6Q9BXS9 759 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 CYP2D7A0A087X1C5 515 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 LRRC10BA6NIK2 292 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 OPLAHO14841 1288 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 GSTA1P08263 222 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 FERP16591 822 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 GNAT2P19087 354 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 KRT9P35527 623 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 IARSP41252 1262 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 VAV2P52735 878 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 HERVK_113P62684 666 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 SPRED3Q2MJR0 410 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
GFAP-228ENST00000638488 NOP53Q9NZM5 478 aaKnown RBP13.41□□□□□ -0.26
GFAP-228ENST00000638488 BCORQ6W2J9 1755 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 SPAG1Q07617 926 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 BLMHQ13867 455 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
GFAP-228ENST00000638488 CCT6BQ92526 530 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 HVCN1Q96D96 273 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 SEC16BQ96JE7 1060 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 PURBQ96QR8 312 aaKnown RBP13.4□□□□□ -0.26
GFAP-228ENST00000638488 KRT23Q9C075 422 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 CNNM2Q9H8M5 875 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
GFAP-228ENST00000638488 PRDM1O75626 825 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 CDKL5O76039 1030 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 ANP32DO95626 131 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 ROR2Q01974 943 aaKnown RBP13.4□□□□□ -0.26
GFAP-228ENST00000638488 PPARAQ07869 468 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 WTAPQ15007 396 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 CREG2Q8IUH2 290 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 MOV10L1Q9BXT6 1211 aaKnown RBP13.4□□□□□ -0.26
GFAP-228ENST00000638488 BAIAP2L1Q9UHR4 511 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 SNX12Q9UMY4 172 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
GFAP-228ENST00000638488 A6NHS1 94 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 ZNF185O15231 689 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 IDEP14735 1019 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 RFC4P35249 363 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 PSMD2Q13200 908 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 CCDC181Q5TID7 509 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 KRT40Q6A162 431 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 SPATA4Q8NEY3 305 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
GFAP-228ENST00000638488 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
GFAP-228ENST00000638488 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 LAMB2P55268 1798 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 CFAP73A6NFT4 308 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 PPIP5K2O43314 1243 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 RANBP6O60518 1105 aaKnown RBP13.39□□□□□ -0.27
GFAP-228ENST00000638488 PAEPP09466 180 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 GCLCP48506 637 aaPredicted RBP13.39□□□□□ -0.27
GFAP-228ENST00000638488 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
GFAP-228ENST00000638488 EZH2Q15910 746 aaKnown RBP13.39□□□□□ -0.27
GFAP-228ENST00000638488 CCDC38Q502W7 563 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 HAUS3Q68CZ6 603 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 ANKRD27Q96NW4 1050 aa13.39□□□□□ -0.27
GFAP-228ENST00000638488 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms