RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 EHD4Q9H223 541 aa3.57□□□□□ -1.84
VIM-210ENST00000637053 YY1AP1Q9H869 796 aa3.57□□□□□ -1.84
VIM-210ENST00000637053 CENPJQ9HC77 1338 aaPredicted RBP3.57□□□□□ -1.84
VIM-210ENST00000637053 GCM1Q9NP62 436 aa3.57□□□□□ -1.84
VIM-210ENST00000637053 C9orf78Q9NZ63 289 aaPredicted RBP3.57□□□□□ -1.84
VIM-210ENST00000637053 ST14Q9Y5Y6 855 aa3.57□□□□□ -1.84
VIM-210ENST00000637053 C19orf81C9J6K1 198 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 KCNQ2O43526 872 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 PIP5K1CO60331 668 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 RHOBTB3O94955 611 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 F2P00734 622 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 HPXP02790 462 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 CELA3BP08861 270 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 NBPF7P0C2Y1 421 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 NCAM1P13591 858 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 RPL17P18621 184 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 OAS2P29728 719 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 CNGA1P29973 690 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 HALP42357 657 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 ST13P50502 369 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 HK2P52789 917 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 NAP1L1P55209 391 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 FKBP4Q02790 459 aaKnown RBP eCLIP3.56□□□□□ -1.84
VIM-210ENST00000637053 SSPNQ14714 243 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 ZXDCQ2QGD7 858 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 TKFCQ3LXA3 575 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 RPS26P11Q5JNZ5 115 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 TCERG1LQ5VWI1 586 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 LMBRD2Q68DH5 695 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 TTLL5Q6EMB2 1281 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 ZCCHC8Q6NZY4 707 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 C16orf87Q6PH81 154 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 MPRIPQ6WCQ1 1025 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 MMS22LQ6ZRQ5 1243 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 C16orf86Q6ZW13 317 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 BRSK2Q8IWQ3 736 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 CLASRPQ8N2M8 674 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 APPL2Q8NEU8 664 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 NELL2Q99435 816 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 FEZ1Q99689 392 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 SGPP1Q9BX95 441 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 FOXQ1Q9C009 403 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 TSPY26PQ9H489 355 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 SUDS3Q9H7L9 328 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 ZNF408Q9H9D4 720 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 PRDM5Q9NQX1 630 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 SH3GLB2Q9NR46 395 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 CNOT6Q9ULM6 557 aaKnown RBP3.56□□□□□ -1.84
VIM-210ENST00000637053 MAPK8IP1Q9UQF2 711 aa3.56□□□□□ -1.84
VIM-210ENST00000637053 A6NCN8 305 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 ERICH4A6NGS2 130 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 FAM155AB1AL88 458 aaPredicted RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 ALG1L2C9J202 215 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 SLITRK5O94991 958 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 RAC2P15153 192 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 PMLP29590 882 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 MAPK8P45983 427 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 RAB27AP51159 221 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 PDE1CQ14123 709 aaPredicted RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 DDB1Q16531 1140 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 DALRD3Q5D0E6 543 aaKnown RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 KIAA1614Q5VZ46 1190 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 IL31Q6EBC2 164 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 OTUD6AQ7L8S5 288 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 LRP10Q7Z4F1 713 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 WAPLQ7Z5K2 1190 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 C11orf74Q86VG3 221 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 DDX42Q86XP3 938 aaKnown RBP eCLIP3.55□□□□□ -1.84
VIM-210ENST00000637053 ZNF354CQ86Y25 554 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 KIAA0825Q8IV33 1275 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 SAMD14Q8IZD0 417 aaPredicted RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 OR8H2Q8N162 312 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 LILRB2Q8N423 598 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 NKAIN3Q8N8D7 197 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 ENAHQ8N8S7 591 aaPredicted RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 MIGA1Q8NAN2 632 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 FEZF2Q8TBJ5 459 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 PANK1Q8TE04 598 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 ZFPM2Q8WW38 1151 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 ATXN2LQ8WWM7 1075 aaKnown RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 JPH3Q8WXH2 748 aaPredicted RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 VMP1Q96GC9 406 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 SPAG5Q96R06 1193 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 HERPUD2Q9BSE4 406 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 TRIM55Q9BYV6 548 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 CSRNP2Q9H175 543 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 DHX36Q9H2U1 1008 aaKnown RBP3.55□□□□□ -1.84
VIM-210ENST00000637053 ADAMTS10Q9H324 1103 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 NPHS2Q9NP85 383 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 TMEM260Q9NX78 707 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 DCAF16Q9NXF7 216 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 ZIM2Q9NZV7 527 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 RABL2BQ9UNT1 228 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 KCTD3Q9Y597 815 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 CSADQ9Y600 493 aa3.55□□□□□ -1.84
VIM-210ENST00000637053 WASHC2AQ641Q2 1341 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 WASHC2CQ9Y4E1 1318 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 FAM170AA1A519 330 aa3.54□□□□□ -1.84
VIM-210ENST00000637053 KLRG2A4D1S0 409 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms