RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 MFAP3P55082 362 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 YWHAGP61981 247 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 HDAC1Q13547 482 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-209ENST00000635750 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 EFHBQ8N7U6 833 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 MAP3K15Q6ZN16 1313 aa6.03□□□□□ -1.44
SCN1A-209ENST00000635750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.02□□□□□ -1.44
SCN1A-209ENST00000635750 INO80B-WBP1J3KQ70 363 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 BRD3Q15059 726 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 STX19Q8N4C7 294 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ZBTB9Q96C00 473 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 CENPKQ9BS16 269 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 INO80BQ9C086 356 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SOS2Q07890 1332 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 KCNK3O14649 394 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TFAP4Q01664 338 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SURF1Q15526 300 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 GALNT17Q6IS24 598 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ANKS3Q6ZW76 656 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 PLA2G4DQ86XP0 818 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TBC1D19Q8N5T2 526 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 KCTD6Q8NC69 237 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 PI4K2BQ8TCG2 481 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 LBHD1Q9BQE6 289 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 DOLKQ9UPQ8 538 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TIAM1Q13009 1591 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 RNMTO43148 476 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 POLA2Q14181 598 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 CAPRIN1Q14444 709 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 IMPG1Q17R60 797 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 KIAA1755Q5JYT7 1200 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 E4F1Q66K89 784 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 DSTYKQ6XUX3 929 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ARMCX3Q9UH62 379 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 FRMPD2Q68DX3 1309 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 E9PMD0 336 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 LUC7L3O95232 432 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 EEF1DP29692 281 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SKOR1P84550 965 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ABCB5Q2M3G0 1257 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TRIM67Q6ZTA4 783 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TXLNGQ9NUQ3 528 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SCOCQ9UIL1 159 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 MID2Q9UJV3 735 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ASXL1Q8IXJ9 1541 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SNX2O60749 519 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 EIF2B5Q13144 721 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 ZBTB41Q5SVQ8 909 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TTC19Q6DKK2 380 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 KRT80Q6KB66 452 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 CCHCR1Q8TD31 782 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SLC10A4Q96EP9 437 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 PSMB7Q99436 277 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 EYA2O00167 538 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 KRT8P05787 483 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TAC1P20366 129 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 NLRP12P59046 1061 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 FLOT2Q14254 428 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SLC9A5Q14940 896 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TRIM68Q6AZZ1 485 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 C2orf69Q8N8R5 385 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 SERPINI1Q99574 410 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 METTL22Q9BUU2 404 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 HNRNPDLO14979 420 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 NPM3O75607 178 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 MYL7Q01449 175 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 DEPDC1BQ8WUY9 529 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 COA7Q96BR5 231 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 MTBPQ96DY7 904 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 IFT43Q96FT9 208 aa6.02□□□□□ -1.45
SCN1A-209ENST00000635750 INTS4Q96HW7 963 aaKnown RBP6.02□□□□□ -1.45
SCN1A-209ENST00000635750 TRIM60Q495X7 471 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 C7orf31Q8N865 590 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 DNAJC7Q99615 494 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 RGL1Q9NZL6 768 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF202O95125 648 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TECP42680 631 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 VPS41P49754 854 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 IL9RQ01113 521 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ICA1Q05084 483 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 CAPN12Q6ZSI9 719 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 RASEFQ8IZ41 740 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TMCO5AQ8N6Q1 288 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ERO1AQ96HE7 468 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 FAM207AQ9NSI2 230 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 KIF17Q9P2E2 1029 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 TNNQ9UQP3 1299 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 THRAP3Q9Y2W1 955 aaKnown RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MYO1FO00160 1098 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MXD4Q14582 209 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 KIF19Q2TAC6 998 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 ZNF772Q68DY9 489 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-209ENST00000635750 WDR48Q8TAF3 677 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 SH3KBP1Q96B97 665 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.01□□□□□ -1.453e-8■□□□□ 9.3
SCN1A-209ENST00000635750 TMEM106CQ9BVX2 250 aa6.01□□□□□ -1.45
SCN1A-209ENST00000635750 MTIF3Q9H2K0 278 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms