RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 USP31Q70CQ4 1352 aa3.98□□□□□ -1.77
SMARCB1-208ENST00000634926 MROH6A6NGR9 719 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 MINDY4BA8MYZ0 360 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 ATE1O95260 518 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 ENDOUP21128 410 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 RPL13P26373 211 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 ST13P50502 369 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 SPDYAQ5MJ70 313 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 PRR31Q5SQ13 230 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 TTLL7Q6ZT98 887 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 FAM26EQ8N5C1 309 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 TXNDC5Q8NBS9 432 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 MRRFQ96E11 262 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 SLC6A18Q96N87 628 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 FCRL3Q96P31 734 aaPredicted RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 SRRTQ9BXP5 876 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 MKRN2Q9H000 416 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 IGSF5Q9NSI5 407 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 KIAA1522Q9P206 1035 aaPredicted RBP3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 SIT1Q9Y3P8 196 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 ABCC10Q5T3U5 1492 aa3.97□□□□□ -1.77
SMARCB1-208ENST00000634926 A0A1W2PQJ5 194 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 GSNP06396 782 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 IFNGR1P15260 489 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 GBP2P32456 591 aaPredicted RBP3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 CRKP46108 304 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 ZNF326Q5BKZ1 582 aaKnown RBP3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 FAM196AQ6ZSG2 479 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 FBXO33Q7Z6M2 555 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 NLGN2Q8NFZ4 835 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 GIPC2Q8TF65 315 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 FAM161BQ96MY7 647 aa3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 C11orf84Q9BUA3 381 aaPredicted RBP3.96□□□□□ -1.78
SMARCB1-208ENST00000634926 NPIPB8E9PQR5 432 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 DDX3XO00571 662 aaKnown RBP eCLIP3.95□□□□□ -1.781e-7■■■□□ 18.9
SMARCB1-208ENST00000634926 VAMP1P23763 118 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 CLCQ05315 142 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 RAD51AP2Q09MP3 1159 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 FHL2Q14192 279 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 SNAP47Q5SQN1 464 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 FBXL19Q6PCT2 694 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 USP51Q70EK9 711 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 NLRC3Q7RTR2 1065 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 IGDCC4Q8TDY8 1250 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 BRF1Q92994 677 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 MBD6Q96DN6 1003 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 PTCHD1Q96NR3 888 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 SLC9A7Q96T83 725 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 RWDD3Q9Y3V2 267 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 KIAA0586Q9BVV6 1533 aa3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 PRG4Q92954 1404 aaPredicted RBP3.95□□□□□ -1.78
SMARCB1-208ENST00000634926 PCSK5Q92824 1860 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 GLI2P10070 1586 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 FAM86C2PA6NEL3 165 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 LAMTOR5O43504 91 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 CORO7P57737 925 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 ZNF445P59923 1031 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 KIAA2012Q0VF49 1180 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 FAM26FQ5R3K3 315 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 MTA3Q9BTC8 594 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 MCMBPQ9BTE3 642 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 RSRP1Q9BUV0 290 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 DSCC1Q9BVC3 393 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 WDR26Q9H7D7 661 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 EHMT1Q9H9B1 1298 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 COPRSQ9NQ92 184 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 PARP2Q9UGN5 583 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 MAP3K4Q9Y6R4 1608 aa3.94□□□□□ -1.78
SMARCB1-208ENST00000634926 KDM6BO15054 1643 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 SMARCA5O60264 1052 aaPredicted RBP3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 NME1P15531 152 aaKnown RBP3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 L1CAMP32004 1257 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 SMN1Q16637 294 aaKnown RBP3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 EAPPQ56P03 285 aaPredicted RBP3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 DCAF15Q66K64 600 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 USP48Q86UV5 1035 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 PPFIBP1Q86W92 1011 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 C7orf61Q8IZ16 206 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 CHFRQ96EP1 664 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 IKZF4Q9H2S9 585 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 PRR13Q9NZ81 148 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 ABCC2Q92887 1545 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 IQGAP2Q13576 1575 aa3.93□□□□□ -1.78
SMARCB1-208ENST00000634926 UHRF1BP1LA0JNW5 1464 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 DISP1Q96F81 1524 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 UGGT2Q9NYU1 1516 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 PATE3B3GLJ2 98 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 TNFRSF10CO14798 259 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 GREM1O60565 184 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 CYP2C8P10632 490 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 DAB2P98082 770 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 TDRD10Q5VZ19 366 aaKnown RBP3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 BORAQ6PGQ7 559 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 CYP2R1Q6VVX0 501 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 RELL1Q8IUW5 271 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 KYQ8NBH2 561 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 LRRC3Q9BY71 257 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 BCL11AQ9H165 835 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 KIAA0556O60303 1618 aa3.92□□□□□ -1.78
SMARCB1-208ENST00000634926 NPEPPSL1A6NEC2 478 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms