RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 TBC1D32Q96NH3 1257 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 TAAR1Q96RJ0 339 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 PSTPIP2Q9H939 334 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 PXMP2Q9NR77 195 aa16.99■□□□□ 0.31
CDC42BPB-209ENST00000634889 STXBP3O00186 592 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 CDKL5O76039 1030 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 RARBP10826 455 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 NAPAP54920 295 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 SCRN1Q12765 414 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 PHKBQ93100 1093 aa16.98■□□□□ 0.31
CDC42BPB-209ENST00000634889 FRMPD4Q14CM0 1322 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 MKI67P46013 3256 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 MEIS2O14770 477 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 RABEP1Q15276 862 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 PKN1Q16512 942 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 UBE2Q1Q7Z7E8 422 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 FBXO16Q8IX29 292 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 SMARCC2Q8TAQ2 1214 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 GLT8D2Q9H1C3 349 aa16.97■□□□□ 0.31
CDC42BPB-209ENST00000634889 DUSP11O75319 330 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 FARP2O94887 1054 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 EIF2AK2P19525 551 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 SSRP1Q08945 709 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 STXBP2Q15833 593 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 IQSEC1Q6DN90 963 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 TAPT1Q6NXT6 567 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 EEPD1Q7L9B9 569 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 FCHSD1Q86WN1 690 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 PDCD2LQ9BRP1 358 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 RIC8AQ9NPQ8 531 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-209ENST00000634889 RBM47A0AV96 593 aaKnown RBP16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 DEXIO95424 95 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 NR3C2P08235 984 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 ADCY7P51828 1080 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 PGM5Q15124 567 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 ME3Q16798 604 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 USP17L6PQ6QN14 398 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 FAM177A1Q8N128 213 aaPredicted RBP16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 ARRDC4Q8NCT1 418 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 GTF3C6Q969F1 213 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 SH3GLB2Q9NR46 395 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 STK36Q9NRP7 1315 aa16.95■□□□□ 0.3
CDC42BPB-209ENST00000634889 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 DNM1LO00429 736 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 ST18O60284 1047 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 LARGE1O95461 756 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 ADCYAP1R1P41586 468 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 TNFAIP2Q03169 654 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CDC42BPB-209ENST00000634889 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 ADCY6O43306 1168 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 STAM2O75886 525 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 CCND2P30279 289 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 MNX1P50219 401 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 NKX3-2P78367 333 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 XRRA1Q6P2D8 792 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 NECAB2Q7Z6G3 386 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 RNF180Q86T96 592 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 VSIG10LQ86VR7 867 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 C6orf50Q9HD87 102 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 PDGFCQ9NRA1 345 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 GNEQ9Y223 722 aaKnown RBP16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 Q9Y3F1 56 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
CDC42BPB-209ENST00000634889 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 SPDYE3A6NKU9 549 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 KBTBD13C9JR72 458 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 NKRFO15226 690 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 FOSP01100 380 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 SMPD1P17405 629 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 CST5P28325 142 aaPredicted RBP16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 GNA11P29992 359 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 GJA9P57773 515 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 AP3B2Q13367 1082 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 LRRC41Q15345 812 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 UBE2SQ16763 222 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 DUSP28Q4G0W2 176 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 PCNX4Q63HM2 1172 aa16.92■□□□□ 0.3
CDC42BPB-209ENST00000634889 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms