RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 LCHNA4D1U4 455 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 TAP1Q03518 808 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 PDE4DQ08499 809 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-206ENST00000634451 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
LINC00339-206ENST00000634451 TMEM67Q5HYA8 995 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 ARNTL2Q8WYA1 636 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 DHX38Q92620 1227 aaKnown RBP15.17■□□□□ 0.02
LINC00339-206ENST00000634451 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
LINC00339-206ENST00000634451 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
LINC00339-206ENST00000634451 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
LINC00339-206ENST00000634451 HSPD1P10809 573 aaKnown RBP15.16■□□□□ 0.02
LINC00339-206ENST00000634451 CPT1AP50416 773 aa15.16■□□□□ 0.02
LINC00339-206ENST00000634451 ALX1Q15699 326 aa15.16■□□□□ 0.02
LINC00339-206ENST00000634451 ANKRD45Q5TZF3 282 aa15.16■□□□□ 0.02
LINC00339-206ENST00000634451 A6NJR5 290 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 LPXNO60711 386 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 SNHG28P0DPA3 235 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 PDE1AP54750 535 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 LY6KQ17RY6 165 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 GDF6Q6KF10 455 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-206ENST00000634451 HERC6Q8IVU3 1022 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 KAT2BQ92831 832 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 KHSRPQ92945 711 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00339-206ENST00000634451 WNT8BQ93098 351 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
LINC00339-206ENST00000634451 FTOQ9C0B1 505 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC00339-206ENST00000634451 SORBS3O60504 671 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 SUPT20HL2P0C7V6 817 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 DEFB103AP81534 67 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 GRB10Q13322 594 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 SEPT14Q6ZU15 432 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 CHST3Q7LGC8 479 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 SCFD2Q8WU76 684 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 CRBNQ96SW2 442 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 EPHX3Q9H6B9 360 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
LINC00339-206ENST00000634451 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 TCP11L1Q9NUJ3 509 aa15.14■□□□□ 0.01
LINC00339-206ENST00000634451 PFKMP08237 780 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 MMP3P08254 477 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 ARHGAP1Q07960 439 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 HIC1Q14526 733 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 PTGISQ16647 500 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 NFRKBQ6P4R8 1299 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 SEZ6LQ9BYH1 1024 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 KIAA1217Q5T5P2 1943 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 WDR19Q8NEZ3 1342 aa15.13■□□□□ 0.01
LINC00339-206ENST00000634451 MYH6P13533 1939 aa15.12■□□□□ 0.01
LINC00339-206ENST00000634451 ZNF200P98182 395 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-206ENST00000634451 CDC37Q16543 378 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-206ENST00000634451 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-206ENST00000634451 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
LINC00339-206ENST00000634451 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
LINC00339-206ENST00000634451 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
LINC00339-206ENST00000634451 LAMA4Q16363 1823 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 PITPNM1O00562 1244 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 NBNO60934 754 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 ACTN1P12814 892 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 WDR5P61964 334 aaKnown RBP15.11■□□□□ 0.01
LINC00339-206ENST00000634451 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 RETREG2Q8NC44 543 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-206ENST00000634451 CD320Q9NPF0 282 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 NOD1Q9Y239 953 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 MYH7BA7E2Y1 1941 aa15.11■□□□□ 0.01
LINC00339-206ENST00000634451 LOC102724159A0A0B4J2E5 919 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00339-206ENST00000634451 TLL1O43897 1013 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 EIF2AK2P19525 551 aaKnown RBP15.1■□□□□ 0.01
LINC00339-206ENST00000634451 POU3F3P20264 500 aaPredicted RBP15.1■□□□□ 0.01
LINC00339-206ENST00000634451 RFC2P35250 354 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 MBTPS1Q14703 1052 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 PWP2Q15269 919 aaKnown RBP15.1■□□□□ 0.01
LINC00339-206ENST00000634451 FAM117BQ6P1L5 589 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 MFSD6Q6ZSS7 791 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 LNPKQ9C0E8 428 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 HDAC6Q9UBN7 1215 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 MYO7AQ13402 2215 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 RAD50Q92878 1312 aa15.1■□□□□ 0.01
LINC00339-206ENST00000634451 OPLAHO14841 1288 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-206ENST00000634451 KDM4AO75164 1064 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 RRP1P56182 461 aaKnown RBP15.09■□□□□ 0.01
LINC00339-206ENST00000634451 BFSP2Q13515 415 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms