RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 FAM126BQ8IXS8 530 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 SLC43A3Q8NBI5 491 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 TMEM87BQ96K49 555 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
CHD2-217ENST00000629136 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 TBX21Q9UL17 535 aa12.52□□□□□ -0.41
CHD2-217ENST00000629136 DCDC2CA8MYV0 355 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 DDAH1O94760 285 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
CHD2-217ENST00000629136 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 COPS5Q92905 334 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 LRRC2Q9BYS8 371 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 PCDHA1Q9Y5I3 950 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 GRIN2DO15399 1336 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 CDH23Q9H251 3354 aa12.51□□□□□ -0.41
CHD2-217ENST00000629136 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 B4DLN1 442 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHD2-217ENST00000629136 CABYRO75952 493 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 CD4P01730 458 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 RAG1P15918 1043 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 RXRAP19793 462 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 LIFRP42702 1097 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
CHD2-217ENST00000629136 PSMC6P62333 389 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 PURAQ00577 322 aaKnown RBP12.5□□□□□ -0.41
CHD2-217ENST00000629136 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 RASEFQ8IZ41 740 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 CTCFLQ8NI51 663 aaPredicted RBP12.5□□□□□ -0.41
CHD2-217ENST00000629136 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
CHD2-217ENST00000629136 VTI1AQ96AJ9 217 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 TMEM39AQ9NV64 488 aa12.5□□□□□ -0.41
CHD2-217ENST00000629136 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 ZEB2O60315 1214 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
CHD2-217ENST00000629136 HOXA13P31271 388 aaPredicted RBP12.49□□□□□ -0.41
CHD2-217ENST00000629136 CPT1AP50416 773 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 EPHB4P54760 987 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 SHHQ15465 462 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 STXBP2Q15833 593 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 ADCK5Q3MIX3 580 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 SGMS1Q86VZ5 419 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 RAB11FIP4Q86YS3 637 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 IL31RAQ8NI17 732 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 MAP3K20Q9NYL2 800 aaKnown RBP12.49□□□□□ -0.41
CHD2-217ENST00000629136 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
CHD2-217ENST00000629136 PTPRSQ13332 1948 aa12.49□□□□□ -0.41
CHD2-217ENST00000629136 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 A6NJR5 290 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 RGS20O76081 388 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 TIMP1P01033 207 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 NR3C2P08235 984 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 KIF5BP33176 963 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 FPGSQ05932 587 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 PGM5Q15124 567 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 LY6KQ17RY6 165 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 TSGA10IPQ3SY00 556 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 GPR153Q6NV75 609 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 SEPT14Q6ZU15 432 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 CMTR1Q8N1G2 835 aaKnown RBP12.48□□□□□ -0.41
CHD2-217ENST00000629136 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
CHD2-217ENST00000629136 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 PIBF1Q8WXW3 757 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 NEK1Q96PY6 1258 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CHD2-217ENST00000629136 COL6A3P12111 3177 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 UMODL1Q5DID0 1318 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
CHD2-217ENST00000629136 B4GALT4O60513 344 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 MYL3P08590 195 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 KCNA4P22459 653 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
CHD2-217ENST00000629136 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 TRAF1Q13077 416 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 PPP1R12CQ9BZL4 782 aa12.47□□□□□ -0.41
CHD2-217ENST00000629136 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 EIF3JO75822 258 aaKnown RBP12.46□□□□□ -0.41
CHD2-217ENST00000629136 MMP3P08254 477 aa12.46□□□□□ -0.41
CHD2-217ENST00000629136 POLR2MP0CAP2 368 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms