RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 MTG1Q9BT17 334 aaPredicted RBP14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 UMODL1Q5DID0 1318 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 MYH6P13533 1939 aa14.56□□□□□ -0.08
SOX2-OT-247ENST00000628347 SUPT20HL2P0C7V6 817 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 ACRP10323 421 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 FOSL2P15408 326 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 GHRHRQ02643 423 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 TTLL4Q14679 1199 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 SEC23AQ15436 765 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 MAFAQ8NHW3 353 aaPredicted RBP14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 SYTL5Q8TDW5 730 aaPredicted RBP14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 TIFAQ96CG3 184 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 IWS1Q96ST2 819 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 UBAC1Q9BSL1 405 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 WNT8AQ9H1J5 351 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 MTIF3Q9H2K0 278 aaKnown RBP14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 JMJD4Q9H9V9 463 aa14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
SOX2-OT-247ENST00000628347 SPTBN5Q9NRC6 3674 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 FGBP02675 491 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 MYL3P08590 195 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 TXNP10599 105 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 PTPN11Q06124 597 aaPredicted RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 IFIT1BQ5T764 474 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 NFRKBQ6P4R8 1299 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 CCDC62Q6P9F0 684 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 RPUSD2Q8IZ73 545 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 TBC1D5Q92609 795 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 COPS5Q92905 334 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 PBX4Q9BYU1 374 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 GPHNQ9NQX3 736 aaPredicted RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 SUPT16HQ9Y5B9 1047 aaKnown RBP14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 KIAA1217Q5T5P2 1943 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 PRUNE2Q8WUY3 3088 aa14.54□□□□□ -0.08
SOX2-OT-247ENST00000628347 ARIH2O95376 493 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 PFKMP08237 780 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 CCL23P55773 120 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 GRIN2CQ14957 1233 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 RAB30Q15771 203 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 NBPF20Q3BBV1 942 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 CYB5R4Q7L1T6 521 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 RUFY2Q8WXA3 655 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 TAAR1Q96RJ0 339 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 MAP3K20Q9NYL2 800 aaKnown RBP14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 COL20A1Q9P218 1284 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 VCANP13611 3396 aa14.53□□□□□ -0.08
SOX2-OT-247ENST00000628347 PALM3A6NDB9 673 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 CHMLP26374 656 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 STXBP2Q15833 593 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 STAG2Q8N3U4 1231 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 SAMD3Q8N6K7 520 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 RMDN3Q96TC7 470 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 AMNQ9BXJ7 453 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 CXXC1Q9P0U4 656 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
SOX2-OT-247ENST00000628347 KLRF2D3W0D1 207 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 OPLAHO14841 1288 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 DHX16O60231 1041 aaKnown RBP14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 GH1P01241 217 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 CYP21A2P08686 494 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 CYP2C9P11712 490 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 RFC2P35250 354 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 PBX2P40425 430 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 HSD17B4P51659 736 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 ARHGAP1Q07960 439 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 TRDNQ13061 729 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 EMID1Q96A84 441 aaPredicted RBP14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 SCLYQ96I15 445 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 COL25A1Q9BXS0 654 aaPredicted RBP14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 MSRAQ9UJ68 235 aa14.51□□□□□ -0.09
SOX2-OT-247ENST00000628347 GBF1Q92538 1859 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 TANC1Q9C0D5 1861 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 ZBTB5O15062 677 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 EIF3JO75822 258 aaKnown RBP14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 MMP3P08254 477 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 PTH1RQ03431 593 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 TRAF1Q13077 416 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 GRM4Q14833 912 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 ARHGEF16Q5VV41 709 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 OTOP2Q7RTS6 562 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 SESTD1Q86VW0 696 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 RIOX1Q9H6W3 641 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 PXMP2Q9NR77 195 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 MYO9BQ13459 2157 aa14.5□□□□□ -0.09
SOX2-OT-247ENST00000628347 SGSM2O43147 1006 aa14.49□□□□□ -0.09
SOX2-OT-247ENST00000628347 PPP1R11O60927 126 aaPredicted RBP14.49□□□□□ -0.09
SOX2-OT-247ENST00000628347 CFBP00751 764 aa14.49□□□□□ -0.09
SOX2-OT-247ENST00000628347 NR3C2P08235 984 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms