RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 MYH7BA7E2Y1 1941 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 SCN10AQ9Y5Y9 1956 aa14.09□□□□□ -0.15
UBR1-212ENST00000627960 OPLAHO14841 1288 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 PPP1R11O60927 126 aaPredicted RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 ARIH2O95376 493 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 ANTXR2P58335 489 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 GHRHRQ02643 423 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 TROAPQ12815 778 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 TTLL4Q14679 1199 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 SLC35G1Q2M3R5 365 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 BRDTQ58F21 947 aaPredicted RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 TMEM67Q5HYA8 995 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 CCDC62Q6P9F0 684 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 TMEM199Q8N511 208 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 IGDCC4Q8TDY8 1250 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 COPS5Q92905 334 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 LSG1Q9H089 658 aaKnown RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 RIOX1Q9H6W3 641 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
UBR1-212ENST00000627960 STXBP5LQ9Y2K9 1186 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 PCDHA1Q9Y5I3 950 aa14.08□□□□□ -0.16
UBR1-212ENST00000627960 A6NJR5 290 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 KPNA6O60684 536 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 CFBP00751 764 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 CSF2RAP15509 400 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 CYP2C18P33260 490 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 HSD17B4P51659 736 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 STXBP2Q15833 593 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 ZNF697Q5TEC3 545 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 ARHGEF16Q5VV41 709 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 CATIPQ7Z7H3 387 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 PIGSQ96S52 555 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBR1-212ENST00000627960 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
UBR1-212ENST00000627960 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
UBR1-212ENST00000627960 CYTH3O43739 400 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 B4GALT4O60513 344 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 EIF3JO75822 258 aaKnown RBP14.06□□□□□ -0.16
UBR1-212ENST00000627960 NR3C2P08235 984 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 EIF2AK2P19525 551 aaKnown RBP14.06□□□□□ -0.16
UBR1-212ENST00000627960 TRAF1Q13077 416 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 SEPT14Q6ZU15 432 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 CENPQQ7L2Z9 268 aaPredicted RBP14.06□□□□□ -0.16
UBR1-212ENST00000627960 HOMER1Q86YM7 354 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 FAM161BQ96MY7 647 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 GUCD1Q96NT3 240 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 ALDH8A1Q9H2A2 487 aaPredicted RBP14.06□□□□□ -0.16
UBR1-212ENST00000627960 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 HIPK3Q9H422 1215 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 UMODL1Q5DID0 1318 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 COL6A3P12111 3177 aa14.06□□□□□ -0.16
UBR1-212ENST00000627960 PNMA6FA0A0J9YX94 578 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
UBR1-212ENST00000627960 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
UBR1-212ENST00000627960 ACRP10323 421 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 ARHGAP1Q07960 439 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 LY6KQ17RY6 165 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 NBPF20Q3BBV1 942 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 BMP2KLQ5H9B9 411 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 ZNF365Q70YC5 407 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 MAP3K14Q99558 947 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 NOC4LQ9BVI4 516 aaKnown RBP14.05□□□□□ -0.16
UBR1-212ENST00000627960 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 IL23AQ9NPF7 189 aa14.05□□□□□ -0.16
UBR1-212ENST00000627960 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
UBR1-212ENST00000627960 SLC27A2O14975 620 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 PRC1O43663 620 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 GH1P01241 217 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 SUPT20HL2P0C7V6 817 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 MCM5P33992 734 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 NECTIN1Q15223 517 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 RASIP1Q5U651 963 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 PSRC1Q6PGN9 363 aaPredicted RBP14.04□□□□□ -0.16
UBR1-212ENST00000627960 CASC1Q6TDU7 716 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 SKAP1Q86WV1 359 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 TMTC2Q8N394 836 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 SLC17A8Q8NDX2 589 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 AFG1LQ8WV93 481 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 PDCD2LQ9BRP1 358 aa14.04□□□□□ -0.16
UBR1-212ENST00000627960 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
UBR1-212ENST00000627960 DDX41Q9UJV9 622 aaKnown RBP14.04□□□□□ -0.16
UBR1-212ENST00000627960 GCOM1H8Y6P7 765 aaPredicted RBP14.03□□□□□ -0.16
UBR1-212ENST00000627960 DDAH1O94760 285 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 FGBP02675 491 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 MMP3P08254 477 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 POLR2MP0CAP2 368 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 HOXA13P31271 388 aaPredicted RBP14.03□□□□□ -0.16
UBR1-212ENST00000627960 CCL23P55773 120 aa14.03□□□□□ -0.16
UBR1-212ENST00000627960 PTPN11Q06124 597 aaPredicted RBP14.03□□□□□ -0.16
UBR1-212ENST00000627960 CREB3L3Q68CJ9 461 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms