RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 REXO1Q8N1G1 1221 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 CUL5Q93034 780 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 GOLPH3LQ9H4A5 285 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 PSTPIP2Q9H939 334 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 RRAGCQ9HB90 399 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 CSADQ9Y600 493 aa11.33□□□□□ -0.6
SOX2-OT-244ENST00000627738 A0A1W2PQ27 194 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 A0A1W2PQ64 194 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 A0A1W2PQD8 194 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 BMP15O95972 392 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 UBE2SQ16763 222 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 CCDC183Q5T5S1 534 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 MOB2Q70IA6 237 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 CLIC6Q96NY7 704 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 SLF1Q9BQI6 1058 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 GLT8D2Q9H1C3 349 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 DACT1Q9NYF0 836 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 FBXO2Q9UK22 296 aaPredicted RBP11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 AFG3L2Q9Y4W6 797 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 MRVI1Q9Y6F6 885 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
SOX2-OT-244ENST00000627738 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 SYCE3A1L190 88 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 CUTAO60888 179 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 NR1I2O75469 434 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 FLOT1O75955 427 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 MCM7P33993 719 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 HMGCS2P54868 508 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 TRAF1Q13077 416 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 MAP1SQ66K74 1059 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 CCDC73Q6ZRK6 1079 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 TBCKQ8TEA7 893 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 ELP3Q9H9T3 547 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
SOX2-OT-244ENST00000627738 OTOFQ9HC10 1997 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 CMA1P23946 247 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 ZNF445P59923 1031 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 ATP2C1P98194 919 aaPredicted RBP11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 GRIN1Q05586 938 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 FAM160A1Q05DH4 1040 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 USP17L6PQ6QN14 398 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 SHC4Q6S5L8 630 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 ARMC9Q7Z3E5 817 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 LDHDQ86WU2 507 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 ENGASEQ8NFI3 743 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 SRPRBQ9Y5M8 271 aaKnown RBP11.3□□□□□ -0.6
SOX2-OT-244ENST00000627738 TRAF5O00463 557 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 MEIS2O14770 477 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 PFKFB1P16118 471 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 NDUFA8P51970 172 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 PPATQ06203 517 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 SNW1Q13573 536 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 CAMK4Q16566 473 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 SPECC1Q5M775 1068 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 ZNF408Q9H9D4 720 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 MRPL11Q9Y3B7 192 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 ZNF536O15090 1300 aa11.29□□□□□ -0.6
SOX2-OT-244ENST00000627738 FAM237AA0A1B0GTK4 181 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms