RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SYNRGQ9UMZ2 1314 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 DYNC1LI2O43237 492 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 NR3C2P08235 984 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 C6orf222P0C671 652 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 SMPD1P17405 629 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 CST5P28325 142 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 METAP2P50579 478 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 EVCP57679 992 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 NKX3-2P78367 333 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 KCNA10Q16322 511 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 DUSP28Q4G0W2 176 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 GNASQ5JWF2 1037 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 SLC39A5Q6ZMH5 540 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
UBE3D-208ENST00000626828 FAM217BQ9NTX9 383 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 V9GY48 417 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-208ENST00000626828 MOXD2PA6NHM9 499 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 H0YGN5 161 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 ADCY6O43306 1168 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
UBE3D-208ENST00000626828 CDC27P30260 824 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 ADD1P35611 737 aaKnown RBP19.31■□□□□ 0.68
UBE3D-208ENST00000626828 FUT2Q10981 343 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 CCSAPQ6IQ19 270 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-208ENST00000626828 SCFD2Q8WU76 684 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 CUL5Q93034 780 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
UBE3D-208ENST00000626828 hCG_1642624A0A1W2PR95 340 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 NKRFO15226 690 aaKnown RBP eCLIP19.3■□□□□ 0.68
UBE3D-208ENST00000626828 EIF2AK2P19525 551 aaKnown RBP19.3■□□□□ 0.68
UBE3D-208ENST00000626828 ACLYP53396 1101 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-208ENST00000626828 LRRC26Q2I0M4 334 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 FCHSD1Q86WN1 690 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 PSTPIP2Q9H939 334 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 PDRG1Q9NUG6 133 aa19.3■□□□□ 0.68
UBE3D-208ENST00000626828 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 ZEB2O60315 1214 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 PDIA3P30101 505 aaKnown RBP19.29■□□□□ 0.68
UBE3D-208ENST00000626828 TTLL4Q14679 1199 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 C1orf53Q5VUE5 145 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 VSIG10LQ86VR7 867 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 SMARCC2Q8TAQ2 1214 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 ZNF274Q96GC6 653 aaPredicted RBP19.29■□□□□ 0.68
UBE3D-208ENST00000626828 PDCD2LQ9BRP1 358 aa19.29■□□□□ 0.68
UBE3D-208ENST00000626828 UPF3BQ9BZI7 483 aaKnown RBP19.29■□□□□ 0.68
UBE3D-208ENST00000626828 CTAGE5O15320 804 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 ASGR1P07306 291 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 TXNP10599 105 aaKnown RBP19.28■□□□□ 0.68
UBE3D-208ENST00000626828 MYCLP12524 364 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-208ENST00000626828 TOB2Q14106 344 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-208ENST00000626828 SEPT14Q6ZU15 432 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 C7orf61Q8IZ16 206 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 GLT1D1Q96MS3 346 aa19.28■□□□□ 0.68
UBE3D-208ENST00000626828 ALDH8A1Q9H2A2 487 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-208ENST00000626828 ELP1O95163 1332 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-208ENST00000626828 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 MYADML2A6NDP7 307 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 hCG_1984214I3L0E3 225 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 MEIS2O14770 477 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 SEC24BO95487 1268 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-208ENST00000626828 BEX3Q00994 111 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 PGM5Q15124 567 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
UBE3D-208ENST00000626828 TMEM63BQ5T3F8 832 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 USP17L6PQ6QN14 398 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 HEATR3Q7Z4Q2 680 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 ZNF713Q8N859 430 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-208ENST00000626828 VTI1AQ96AJ9 217 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 STARD7Q9NQZ5 370 aa19.27■□□□□ 0.68
UBE3D-208ENST00000626828 RBM27Q9P2N5 1060 aaKnown RBP19.27■□□□□ 0.68
UBE3D-208ENST00000626828 ALPK3Q96L96 1907 aa19.27■□□□□ 0.67
UBE3D-208ENST00000626828 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
UBE3D-208ENST00000626828 CABYRO75952 493 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 CCND2P30279 289 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 RTP1P59025 263 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 AKAP17AQ02040 695 aaKnown RBP19.26■□□□□ 0.67
UBE3D-208ENST00000626828 SNX17Q15036 470 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
UBE3D-208ENST00000626828 CCDC62Q6P9F0 684 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 KCNV1Q6PIU1 500 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 IL17RAQ96F46 866 aa19.26■□□□□ 0.67
UBE3D-208ENST00000626828 NID2Q14112 1375 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 NAPAP54920 295 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 CCT2P78371 535 aaKnown RBP19.25■□□□□ 0.67
UBE3D-208ENST00000626828 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 XRRA1Q6P2D8 792 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
UBE3D-208ENST00000626828 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 KIAA1217Q5T5P2 1943 aa19.25■□□□□ 0.67
UBE3D-208ENST00000626828 STAM2O75886 525 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms