RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TTLL1O95922 423 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 TFRCP02786 760 aaKnown RBP7.56□□□□□ -1.2
TCF4-249ENST00000625716 HMGCRP04035 888 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 CAPN2P17655 700 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 ALX1Q15699 326 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 DBN1Q16643 649 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 FAM83BQ5T0W9 1011 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 VPS53Q5VIR6 699 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 CWC27Q6UX04 472 aaKnown RBP7.56□□□□□ -1.2
TCF4-249ENST00000625716 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 NEDD1Q8NHV4 660 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 PORCNQ9H237 461 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 SLC5A4Q9NY91 659 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 MTMR4Q9NYA4 1195 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 BTBD7Q9P203 1132 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 F5H6K3 240 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ZNF213O14771 459 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 STRNO43815 780 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ZBED4O75132 1171 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 CNMDO75829 334 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 SLC25A27O95847 323 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 FGAP02671 866 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 GJB1P08034 283 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 HSPD1P10809 573 aaKnown RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 XRCC5P13010 732 aaKnown RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 ZKSCAN1P17029 563 aaPredicted RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 GPC1P35052 558 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 MCCD1P59942 119 aaPredicted RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 KLRC3Q07444 240 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 POU4F2Q12837 409 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 IKQ13123 557 aaPredicted RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 RRP12Q5JTH9 1297 aaKnown RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 KIAA1755Q5JYT7 1200 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 LYPD4Q6UWN0 246 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 MFSD6Q6ZSS7 791 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 DPP9Q86TI2 863 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 SHCBP1Q8NEM2 672 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 MKL1Q969V6 931 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ATG4CQ96DT6 458 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ZNF837Q96EG3 531 aaPredicted RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 CEP95Q96GE4 821 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 APBA2Q99767 749 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 SLF1Q9BQI6 1058 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 MOV10L1Q9BXT6 1211 aaKnown RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 SPATC1LQ9H0A9 340 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 RNF41Q9H4P4 317 aaPredicted RBP7.55□□□□□ -1.2
TCF4-249ENST00000625716 MROH8Q9H579 483 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ANAPC4Q9UJX5 808 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 STX8Q9UNK0 236 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 ZSWIM8A7E2V4 1837 aa7.55□□□□□ -1.2
TCF4-249ENST00000625716 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 IGKV6D-41A0A0C4DH26 115 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 VWA5AO00534 786 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 ORC4O43929 436 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 SGPL1O95470 568 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 NDUFB10O96000 172 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 FCER1AP12319 257 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 ERCC3P19447 782 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 COPB2P35606 906 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 STAT3P40763 770 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 GJA8P48165 433 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 HAND2P61296 217 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 TSGA10IPQ3SY00 556 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 TTC22Q5TAA0 569 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 MFSD14CQ5VZR4 134 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 SLFN13Q68D06 897 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 ZNF589Q86UQ0 364 aaPredicted RBP7.54□□□□□ -1.2
TCF4-249ENST00000625716 LRRC47Q8N1G4 583 aaKnown RBP7.54□□□□□ -1.2
TCF4-249ENST00000625716 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
TCF4-249ENST00000625716 GMCL1P1Q8NEA9 526 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 U2AF1L4Q8WU68 220 aaKnown RBP7.54□□□□□ -1.2
TCF4-249ENST00000625716 RUFY2Q8WXA3 655 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 DEFB118Q96PH6 123 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 NUP88Q99567 741 aaPredicted RBP7.54□□□□□ -1.2
TCF4-249ENST00000625716 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.54□□□□□ -1.2
TCF4-249ENST00000625716 CTNNA3Q9UI47 895 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 FEM1BQ9UK73 627 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 PPP1R9AQ9ULJ8 1098 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
TCF4-249ENST00000625716 ZMYM6O95789 1325 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 MYH8P13535 1937 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 TMEM232C9JQI7 657 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 FOXP2O15409 715 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
TCF4-249ENST00000625716 BMP3P12645 472 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 SLC1A4P43007 532 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 CLN3Q13286 438 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 KCTD2Q14681 263 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 TMEM132BQ14DG7 1078 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 IMMTQ16891 758 aaKnown RBP7.53□□□□□ -1.2
TCF4-249ENST00000625716 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 RIOX2Q8IUF8 465 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms