RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RPAINQ86UA6 219 aa16.61■□□□□ 0.25
SNX1-214ENST00000625244 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
SNX1-214ENST00000625244 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
SNX1-214ENST00000625244 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
SNX1-214ENST00000625244 NSUN3Q9H649 340 aaKnown RBP16.61■□□□□ 0.25
SNX1-214ENST00000625244 CACNA1BQ00975 2339 aa16.61■□□□□ 0.25
SNX1-214ENST00000625244 EPG5Q9HCE0 2579 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
SNX1-214ENST00000625244 A6NJR5 290 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 TMEM232C9JQI7 657 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 H3BNC9 293 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 MBTPS2O43462 519 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 FDX1P10109 184 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 ADD2P35612 726 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 SNAP25P60880 206 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 GPM6BQ13491 265 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 IKBKEQ14164 716 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 GDF6Q6KF10 455 aaPredicted RBP16.6■□□□□ 0.25
SNX1-214ENST00000625244 LRRC47Q8N1G4 583 aaKnown RBP16.6■□□□□ 0.25
SNX1-214ENST00000625244 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
SNX1-214ENST00000625244 ATOH1Q92858 354 aaPredicted RBP16.6■□□□□ 0.25
SNX1-214ENST00000625244 COPS5Q92905 334 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 MKL1Q969V6 931 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 SLC4A4Q9Y6R1 1079 aa16.6■□□□□ 0.25
SNX1-214ENST00000625244 GVINP1Q7Z2Y8 2422 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 KPNA6O60684 536 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 EFCAB14O75071 495 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 BMP3P12645 472 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
SNX1-214ENST00000625244 HTRA4P83105 476 aaPredicted RBP16.59■□□□□ 0.25
SNX1-214ENST00000625244 CTC1Q2NKJ3 1217 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 BRDTQ58F21 947 aaPredicted RBP16.59■□□□□ 0.25
SNX1-214ENST00000625244 SLFN13Q68D06 897 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 NSMFQ6X4W1 530 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
SNX1-214ENST00000625244 FBXL6Q8N531 539 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 GMCL1P1Q8NEA9 526 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 DDRGK1Q96HY6 314 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 ZFHX4Q86UP3 3567 aa16.59■□□□□ 0.25
SNX1-214ENST00000625244 STXBP3O00186 592 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 CKBP12277 381 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 STAT2P52630 851 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 ERMP1Q7Z2K6 904 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 CEP95Q96GE4 821 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
SNX1-214ENST00000625244 LCTP09848 1927 aa16.58■□□□□ 0.24
SNX1-214ENST00000625244 PARNO95453 639 aaKnown RBP16.57■□□□□ 0.24
SNX1-214ENST00000625244 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
SNX1-214ENST00000625244 ZXDAP98168 799 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 RBL2Q08999 1139 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
SNX1-214ENST00000625244 TRAF7Q6Q0C0 670 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 ASCL5Q7RTU5 278 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 MYOCDQ8IZQ8 938 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 SAMD11Q96NU1 681 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
SNX1-214ENST00000625244 KMT2EQ8IZD2 1858 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 RAD50Q92878 1312 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
SNX1-214ENST00000625244 NCK2O43639 380 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
SNX1-214ENST00000625244 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
SNX1-214ENST00000625244 PPP2R5BQ15173 497 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 SESTD1Q86VW0 696 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 STAG1Q8WVM7 1258 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
SNX1-214ENST00000625244 ARPP21Q9UBL0 812 aaPredicted RBP16.56■□□□□ 0.24
SNX1-214ENST00000625244 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 ZNF292O60281 2723 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 FRYLO94915 3013 aa16.56■□□□□ 0.24
SNX1-214ENST00000625244 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 PROB1E7EW31 1015 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 H0Y858 1186 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 TTLL1O95922 423 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 HYAL1Q12794 435 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 IKQ13123 557 aaPredicted RBP16.55■□□□□ 0.24
SNX1-214ENST00000625244 SMAD4Q13485 552 aaKnown RBP16.55■□□□□ 0.24
SNX1-214ENST00000625244 FAM160B2Q86V87 743 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 FBXO11Q86XK2 927 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 IRF2BPLQ9H1B7 796 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 TLR9Q9NR96 1032 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 ADD3Q9UEY8 706 aaKnown RBP16.55■□□□□ 0.24
SNX1-214ENST00000625244 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
SNX1-214ENST00000625244 PLXNA3P51805 1871 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX1-214ENST00000625244 TBX10O75333 385 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 PRDM1O75626 825 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 AMHP03971 560 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 AVPR2P30518 371 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX1-214ENST00000625244 SBK1Q52WX2 424 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 KAT2BQ92831 832 aa16.54■□□□□ 0.24
SNX1-214ENST00000625244 WNT8BQ93098 351 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms