RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-215ENST00000624145 SLC17A8Q8NDX2 589 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 DEPDC1BQ8WUY9 529 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 FAM149B1Q96BN6 582 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 UIMC1Q96RL1 719 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 BLZF1Q9H2G9 400 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 METTL14Q9HCE5 456 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 CCDC87Q9NVE4 849 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 AATFQ9NY61 560 aaKnown RBP eCLIP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 WARS2Q9UGM6 360 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ARMCX3Q9UH62 379 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 POLR2MP0CAP2 368 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 GFAPP14136 432 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ELF1P32519 619 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 LIG3P49916 1009 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 MAP3K10Q02779 954 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 TMED2Q15363 201 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 DCAF15Q66K64 600 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KRT26Q7Z3Y9 468 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ADAT2Q7Z6V5 191 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 NCAPG2Q86XI2 1143 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 BCAS4Q8TDM0 211 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 AP5M1Q9H0R1 490 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ING2Q9H160 280 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PCDHB4Q9Y5E5 795 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 TROQ12816 1431 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 C11orf95C9JLR9 678 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 M0R2C6 588 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 UBXN8O00124 270 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 CREB3O43889 395 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 SORBS3O60504 671 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ZNF202O95125 648 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KRT7P08729 469 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ALAS1P13196 640 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ZSCAN20P17040 1043 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PAMP19021 973 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 ARPP19P56211 112 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 POLE2P56282 527 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 HDAC4P56524 1084 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 MYL7Q01449 175 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 TCP10Q12799 353 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KCNJ12Q14500 433 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 FAM178BQ8IXR5 827 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 CCHCR1Q8TD31 782 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 SLC26A7Q8TE54 656 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 SRPK1Q96SB4 655 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 JPH2Q9BR39 696 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PALMDQ9NP74 551 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 POLE3Q9NRF9 147 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PANK4Q9NVE7 773 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 MAGED2Q9UNF1 606 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PTPN22Q9Y2R2 807 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 L3MBTL1Q9Y468 752 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PRR23D1E9PI22 279 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 EIF3DO15371 548 aaKnown RBP eCLIP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 MT-ND3P03897 115 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 GSNP06396 782 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 H2AFZP0C0S5 128 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PRR23D2P0DMB1 279 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 RECQLP46063 649 aaPredicted RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PAPOLAP51003 745 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 PMS1P54277 932 aaKnown RBP4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KCNA1Q09470 495 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 HIF1AQ16665 826 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 H2AFVQ71UI9 128 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 RETREG2Q8NC44 543 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KLHL29Q96CT2 875 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 NACC1Q96RE7 527 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 YY1AP1Q9H869 796 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 CFTRP13569 1480 aa4.38□□□□□ -1.71
ANKRD28-215ENST00000624145 KDM2BQ8NHM5 1336 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 MYO1FO00160 1098 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 MED7O43513 233 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 BNIP3LO60238 219 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 SNX2O60749 519 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 CSPG5O95196 566 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 RPSAP08865 295 aaKnown RBP4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 ZNF18P17022 549 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 DDX5P17844 614 aaKnown RBP4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 DRP2Q13474 957 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 IMPG1Q17R60 797 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 TAF1BQ53T94 588 aaPredicted RBP4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 TJAP1Q5JTD0 557 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 OR8K1Q8NGG5 319 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 RNF139Q8WU17 664 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 CACTINQ8WUQ7 758 aaKnown RBP4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 EXT2Q93063 718 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 ASPSCR1Q9BZE9 553 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 AKT3Q9Y243 479 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 COL4A3BPQ9Y5P4 624 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 PCDH11XQ9BZA7 1347 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 PCDH11YQ9BZA8 1340 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 FGD5Q6ZNL6 1462 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 ATAD2BQ9ULI0 1458 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 KRT1P04264 644 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 CIITAP33076 1130 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 HADHAP40939 763 aa4.37□□□□□ -1.71
ANKRD28-215ENST00000624145 CCNA1P78396 465 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms