RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 EIF3JO75822 258 aaKnown RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 CPT1AP50416 773 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 TTLL4Q14679 1199 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 STXBP2Q15833 593 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 TRIM60Q495X7 471 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 BRDTQ58F21 947 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 KCNV1Q6PIU1 500 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 NOL8Q76FK4 1167 aaKnown RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 FERMT2Q96AC1 680 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 PDGFCQ9NRA1 345 aa14.4□□□□□ -0.1
LINC00963-217ENST00000624009 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 ZMYND8Q9ULU4 1186 aaPredicted RBP14.4□□□□□ -0.1
LINC00963-217ENST00000624009 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-217ENST00000624009 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 KPNA6O60684 536 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
LINC00963-217ENST00000624009 SLC34A2O95436 690 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 CFBP00751 764 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 POLR2MP0CAP2 368 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 PSMA5P28066 241 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 MAGEA10P43363 369 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-217ENST00000624009 CDK7P50613 346 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 APOA5Q6Q788 366 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 EEPD1Q7L9B9 569 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 HOMER1Q86YM7 354 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 SLC43A3Q8NBI5 491 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 TBC1D5Q92609 795 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 TAAR1Q96RJ0 339 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
LINC00963-217ENST00000624009 PDLIM7Q9NR12 457 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 PXMP2Q9NR77 195 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 COL20A1Q9P218 1284 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 FRMPD4Q14CM0 1322 aa14.39□□□□□ -0.11
LINC00963-217ENST00000624009 A6NJR5 290 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 DCDC2CA8MYV0 355 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 hCG_1984214I3L0E3 225 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 ARVCFO00192 962 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 STAM2O75886 525 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 NR3C2P08235 984 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 CLTBP09497 229 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 FXR1P51114 621 aaKnown RBP eCLIP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 TLE2Q04725 743 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 ADCK5Q3MIX3 580 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 ZNF713Q8N859 430 aaPredicted RBP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 EMID1Q96A84 441 aaPredicted RBP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 LBHD1Q9BQE6 289 aaPredicted RBP14.38□□□□□ -0.11
LINC00963-217ENST00000624009 PDCD2LQ9BRP1 358 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 AGXT2Q9BYV1 514 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 POLR3EQ9NVU0 708 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 MYO9BQ13459 2157 aa14.38□□□□□ -0.11
LINC00963-217ENST00000624009 NID2Q14112 1375 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 CCDC196A0A1B0GTZ2 297 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
LINC00963-217ENST00000624009 TGFB3P10600 412 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 COL9A3Q14050 684 aaPredicted RBP14.37□□□□□ -0.11
LINC00963-217ENST00000624009 XRRA1Q6P2D8 792 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 VSIG10LQ86VR7 867 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 MYL10Q9BUA6 226 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
LINC00963-217ENST00000624009 ZBTB43O43298 467 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 SYN1P17600 705 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 EVCP57679 992 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 LRIT3Q3SXY7 679 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 GPR153Q6NV75 609 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 BLOC1S2Q6QNY1 142 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 MICU3Q86XE3 530 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 TDHQ8IZJ6 230 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
LINC00963-217ENST00000624009 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
LINC00963-217ENST00000624009 TLR3O15455 904 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 PQBP1O60828 265 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 PURAQ00577 322 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 BEX3Q00994 111 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 FAAP100Q0VG06 881 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 PGM5Q15124 567 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 RTN1Q16799 776 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 PPP1R18Q6NYC8 613 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 FAM126BQ8IXS8 530 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 CUL5Q93034 780 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 JAKMIP1Q96N16 626 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 TM6SF1Q9BZW5 370 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 UBE2OQ9C0C9 1292 aaKnown RBP14.35□□□□□ -0.11
LINC00963-217ENST00000624009 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
LINC00963-217ENST00000624009 DDX41Q9UJV9 622 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms