RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
TP53-227ENST00000622645 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
TP53-227ENST00000622645 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 CTAGE9A4FU28 777 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 ZBTB5O15062 677 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 ZRANB2O95218 330 aaKnown RBP eCLIP13.37□□□□□ -0.27
TP53-227ENST00000622645 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
TP53-227ENST00000622645 IDEP14735 1019 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 ALDH1B1P30837 517 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 CRKP46108 304 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 ECM1Q16610 540 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 MIIPQ5JXC2 388 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 FOCADQ5VW36 1801 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
TP53-227ENST00000622645 HAS1Q92839 578 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 NOC4LQ9BVI4 516 aaKnown RBP13.37□□□□□ -0.27
TP53-227ENST00000622645 PARD6BQ9BYG5 372 aa13.37□□□□□ -0.27
TP53-227ENST00000622645 MMP10P09238 476 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 PDIA5Q14554 519 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 GPATCH4Q5T3I0 446 aaKnown RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 GOLGA1Q92805 767 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 CUL5Q93034 780 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.275e-6■□□□□ 11.2
TP53-227ENST00000622645 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 TTYH3Q9C0H2 523 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 DDX25Q9UHL0 483 aaKnown RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 GUCA1BQ9UMX6 200 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 ERCC3P19447 782 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 UNC13DQ70J99 1090 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 SRGAP1Q7Z6B7 1085 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 RABGGTAQ92696 567 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 RAB34Q9BZG1 259 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 DDTLA6NHG4 134 aaPredicted RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
TP53-227ENST00000622645 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
TP53-227ENST00000622645 MSL1Q68DK7 614 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 PPP4R3AQ6IN85 833 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 RAD54LQ92698 747 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 DDX12PQ92771 950 aa13.36□□□□□ -0.27
TP53-227ENST00000622645 MARCH6O60337 910 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 LRRC41Q15345 812 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 FAM114A1Q8IWE2 563 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 NAPGQ99747 312 aaPredicted RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 PDE6BP35913 854 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 PPP1R2P41236 205 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 HERVK_113P62684 666 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 CC2D1AQ6P1N0 951 aaPredicted RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
TP53-227ENST00000622645 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
TP53-227ENST00000622645 SLC1A4P43007 532 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 ZDHHC15Q96MV8 337 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 PCDHA1Q9Y5I3 950 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 SASH3O75995 380 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 MEA1Q16626 185 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 TMEM119Q4V9L6 283 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 SH3BP5LQ7L8J4 393 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 CCDC17Q96LX7 622 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 NUP58Q9BVL2 599 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 EHD4Q9H223 541 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 FAM198AQ9UFP1 575 aa13.34□□□□□ -0.27
TP53-227ENST00000622645 ENC1O14682 589 aa13.33□□□□□ -0.28
TP53-227ENST00000622645 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
TP53-227ENST00000622645 SNAP25P60880 206 aa13.33□□□□□ -0.28
TP53-227ENST00000622645 ZBED6P86452 979 aa13.33□□□□□ -0.28
TP53-227ENST00000622645 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
TP53-227ENST00000622645 CEP112Q8N8E3 955 aa13.33□□□□□ -0.28
TP53-227ENST00000622645 RETREG2Q8NC44 543 aa13.33□□□□□ -0.28
TP53-227ENST00000622645 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms