RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 KIFC2Q96AC6 838 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 DBNDD1Q9H9R9 158 aa14.18□□□□□ -0.14
MSH6-215ENST00000622629 MAP2K1Q02750 393 aaPredicted RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 SF3B3Q15393 1217 aaKnown RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 FNBP4Q8N3X1 1017 aaPredicted RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 MORC2Q9Y6X9 1032 aaPredicted RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 NRXN3Q9Y4C0 1643 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 ATP8B1O43520 1251 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 MOCS3O95396 460 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 CYP2J2P51589 502 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 DPYDQ12882 1025 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 GPATCH4Q5T3I0 446 aaKnown RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 LRP10Q7Z4F1 713 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 ADGRA1Q86SQ6 560 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 FBXO11Q86XK2 927 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 NUCKS1Q9H1E3 243 aaKnown RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 ARHGEF10LQ9HCE6 1279 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 BBOX1O75936 387 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 NR2F2P24468 414 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 KCNJ6P48051 423 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 C2orf54Q08AI8 447 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 IQCDQ96DY2 449 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 SH3GLB2Q9NR46 395 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 FAM217BQ9NTX9 383 aaPredicted RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 BARHL2Q9NY43 387 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 FCER1AP12319 257 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 INTS5Q6P9B9 1019 aaKnown RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
MSH6-215ENST00000622629 POLD4Q9HCU8 107 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 STK17AQ9UEE5 414 aa14.17□□□□□ -0.14
MSH6-215ENST00000622629 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 GCOM1H8Y6P7 765 aaPredicted RBP14.16□□□□□ -0.14
MSH6-215ENST00000622629 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 MYZAPP0CAP1 466 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 GRM4Q14833 912 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 MRFAP1Q9Y605 127 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 NWD1Q149M9 1564 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 TCRBV5S4A2TA0A5A2 114 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 GDF11O95390 407 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 UBXN2AP68543 259 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 PAK2Q13177 524 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 CASP8Q14790 479 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 FBXL16Q8N461 479 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 DDX12PQ92771 950 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 RASSF4Q9H2L5 321 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 WTIPA6NIX2 430 aaPredicted RBP14.16□□□□□ -0.14
MSH6-215ENST00000622629 CCDC169A6NNP5 214 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 GNA14O95837 355 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 SNAP25P60880 206 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 OTUD6BQ8N6M0 293 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 FAM204AQ9H8W3 233 aa14.16□□□□□ -0.14
MSH6-215ENST00000622629 GAS7O60861 476 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 PRPHP41219 470 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 KIF11P52732 1056 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 TMEM60Q9H2L4 133 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 CLEC10AQ8IUN9 316 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 CCDC26Q8TAB7 109 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 CNTNAP5Q8WYK1 1306 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 H0YIN7 160 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 ALDH1B1P30837 517 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 ATP1A2P50993 1020 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 MNAT1P51948 309 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 PPP4R3AQ6IN85 833 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 ADAT2Q7Z6V5 191 aaKnown RBP14.15□□□□□ -0.14
MSH6-215ENST00000622629 ARFGAP2Q8N6H7 521 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 CCDC155Q8N6L0 562 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 PIK3C2AO00443 1686 aa14.15□□□□□ -0.14
MSH6-215ENST00000622629 USP17L15C9J2P7 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L13C9JLJ4 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L11C9JVI0 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L18D6R9N7 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L22D6RA61 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L17D6RBQ6 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L19D6RCP7 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L20D6RJB6 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 PPEF1O14829 653 aaPredicted RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 TDP2O95551 362 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 FTCDO95954 541 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 STAT1P42224 750 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 SLC7A5Q01650 507 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 GUCY2DQ02846 1103 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L24Q0WX57 530 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 PPFIA1Q13136 1202 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 USP17L6PQ6QN14 398 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 CCDC170Q8IYT3 715 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 TCHPQ9BT92 498 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 AMNQ9BXJ7 453 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 COL4A3BPQ9Y5P4 624 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 SF3A3Q12874 501 aaKnown RBP eCLIP14.14□□□□□ -0.15
MSH6-215ENST00000622629 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 LINC00116Q8NCU8 138 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms