RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GUCA1BQ9UMX6 200 aa10.73□□□□□ -0.69
IGHV3-54-201ENST00000622166 SIK3Q9Y2K2 1263 aa10.73□□□□□ -0.69
IGHV3-54-201ENST00000622166 SUGT1Q9Y2Z0 365 aa10.73□□□□□ -0.69
IGHV3-54-201ENST00000622166 TARSL2A2RTX5 802 aaKnown RBP10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 KLRG2A4D1S0 409 aaPredicted RBP10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 H3BQF6 201 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 EIF3JO75822 258 aaKnown RBP10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 LCA5LO95447 670 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 FCER1AP12319 257 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 VAV2P52735 878 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 VSNL1P62760 191 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 LRRC63Q05C16 580 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 EHHADHQ08426 723 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 GPS2Q13227 327 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 SEPT2Q15019 361 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 CALCRLQ16602 461 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 MAN2A1Q16706 1144 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 VWA3BQ502W6 1294 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 PPP4R3AQ6IN85 833 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 AEBP2Q6ZN18 517 aaPredicted RBP10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 FAM196AQ6ZSG2 479 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 KIAA1328Q86T90 577 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 RAD54LQ92698 747 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 RAB34Q9BZG1 259 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 TSGA10Q9BZW7 698 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 CALCOCO1Q9P1Z2 691 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
IGHV3-54-201ENST00000622166 PNMA6FA0A0J9YX94 578 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 TOM1O60784 492 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 RHOXF2BP0C7M4 288 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 TRIM21P19474 475 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 TXKP42681 527 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 CLK2P49760 499 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 KLK7P49862 253 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 ST5P78524 1137 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 MCM6Q14566 821 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 MFSD14BQ5SR56 506 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 HYIQ5T013 277 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 NCAPH2Q6IBW4 605 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 ZNF572Q7Z3I7 529 aaPredicted RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 NOA1Q8NC60 698 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 TBC1D16Q8TBP0 767 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 LARP4BQ92615 738 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 MTMR8Q96EF0 704 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 C8orf37Q96NL8 207 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 NAP1L4Q99733 375 aaKnown RBP10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 RHOXF2Q9BQY4 288 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 UBA5Q9GZZ9 404 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 VIPAS39Q9H9C1 493 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 POLLQ9UGP5 575 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 SWAP70Q9UH65 585 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 PLAGL2Q9UPG8 496 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 SAR1BQ9Y6B6 198 aa10.71□□□□□ -0.69
IGHV3-54-201ENST00000622166 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 PJA2O43164 708 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 TFRCP02786 760 aaKnown RBP10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 SERPINB2P05120 415 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 GCFC2P16383 781 aaKnown RBP10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 PRLRP16471 622 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ITIH3Q06033 890 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZNF543Q08ER8 600 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 KRT79Q5XKE5 535 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 PROM2Q8N271 834 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 RUBCNQ92622 972 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 COA7Q96BR5 231 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 CDK5RAP3Q96JB5 506 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 MMS19Q96T76 1030 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 TSG101Q99816 390 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 NDST4Q9H3R1 872 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 JMJD4Q9H9V9 463 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZCCHC17Q9NP64 241 aaKnown RBP10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 SLC39A2Q9NP94 309 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ARFGEF1Q9Y6D6 1849 aa10.7□□□□□ -0.7
IGHV3-54-201ENST00000622166 ZNF263O14978 683 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 SLC37A4O43826 429 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 USO1O60763 962 aaKnown RBP10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 TACC1O75410 805 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 TDP2O95551 362 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 GYS1P13807 737 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 AKR1B1P15121 316 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 KIF5AQ12840 1032 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 MAPK8IP2Q13387 824 aaPredicted RBP10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 CASP8Q14790 479 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 SPA17Q15506 151 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 MAP9Q49MG5 647 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 MUM1L1Q5H9M0 696 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 PDXDC1Q6P996 788 aa10.69□□□□□ -0.7
IGHV3-54-201ENST00000622166 LRRC55Q6ZSA7 311 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms