RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 LCTP09848 1927 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 LAD1O00515 517 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 CYP2C8P10632 490 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 USP11P51784 963 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 ARL6IP4Q66PJ3 421 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 PPP4R3AQ6IN85 833 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 POTEHQ6S545 545 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 MOXD1Q6UVY6 613 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 RNF207Q6ZRF8 634 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 SAMD3Q8N6K7 520 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 CHST13Q8NET6 341 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 TXNRD2Q9NNW7 524 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 TMEM63CQ9P1W3 806 aa12.1□□□□□ -0.47
CPNE3-212ENST00000621783 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
CPNE3-212ENST00000621783 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 MANSC4A6NHS7 340 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 CYP3A4P08684 503 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 PFKFB1P16118 471 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 CMA1P23946 247 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 CYP3A7P24462 503 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 YY1P25490 414 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 PRPHP41219 470 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 UBXN2AP68543 259 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 FSTL1Q12841 308 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 IL17AQ16552 155 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 CALCRLQ16602 461 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 SMCR8Q8TEV9 937 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 PTPN18Q99952 460 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 MOV10L1Q9BXT6 1211 aaKnown RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
CPNE3-212ENST00000621783 RBPJLQ9UBG7 517 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 RABGAP1Q9Y3P9 1069 aa12.09□□□□□ -0.47
CPNE3-212ENST00000621783 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-212ENST00000621783 NR1I2O75469 434 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 CIITAP33076 1130 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 COPB2P35606 906 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 NDUFA8P51970 172 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 ERVK-9P63128 1117 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 ERVK-24P63145 666 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 FAM160A1Q05DH4 1040 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 CCDC183Q5T5S1 534 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 ZNF784Q8NCA9 323 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-212ENST00000621783 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 LENG9Q96B70 501 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 MAF1Q9H063 256 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
CPNE3-212ENST00000621783 DDX19AQ9NUU7 478 aaKnown RBP12.08□□□□□ -0.48
CPNE3-212ENST00000621783 DACT1Q9NYF0 836 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 CYP39A1Q9NYL5 469 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 FBXO40Q9UH90 709 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 HPSEQ9Y251 543 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
CPNE3-212ENST00000621783 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 SLC25A27O95847 323 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 ERCC3P19447 782 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 Q4G0T1 1027 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 FMR1NBQ8N0W7 255 aaPredicted RBP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 ENGASEQ8NFI3 743 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 PURBQ96QR8 312 aaKnown RBP12.07□□□□□ -0.48
CPNE3-212ENST00000621783 TAAR1Q96RJ0 339 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 ANP32EQ9BTT0 268 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 FAM13BQ9NYF5 915 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 PFASO15067 1338 aa12.07□□□□□ -0.48
CPNE3-212ENST00000621783 IGLV3-22A0A075B6J6 115 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 IGF2BP3O00425 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
CPNE3-212ENST00000621783 KINO60870 393 aaKnown RBP12.06□□□□□ -0.48
CPNE3-212ENST00000621783 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms