RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TRPC3Q13507 836 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 PKN1Q16512 942 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 ARHGEF16Q5VV41 709 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 CNGA4Q8IV77 575 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 IFT81Q8WYA0 676 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 FRMD4BQ9Y2L6 1034 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 CTAGE9A4FU28 777 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 TFRCP02786 760 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 EVX2Q03828 476 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 KIF5AQ12840 1032 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 PPP2R5CQ13362 524 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 SEC23AQ15436 765 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 TAB3Q8N5C8 712 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 SLC44A5Q8NCS7 719 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 CELF1Q92879 486 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 ZNF668Q96K58 619 aaPredicted RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 IFT74Q96LB3 600 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 GSDMAQ96QA5 445 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 SLF1Q9BQI6 1058 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 PHF20Q9BVI0 1012 aa9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 RBM28Q9NW13 759 aaKnown RBP9.15□□□□□ -0.94
PTPDC1-204ENST00000620992 USP17L3A6NCW0 530 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 USP17L4A6NCW7 530 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 PRPF3O43395 683 aaKnown RBP9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 TNNI1P19237 187 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 CYLC1P35663 651 aaPredicted RBP9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 SMTNP53814 917 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 USP17L1Q7RTZ2 530 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 COA7Q96BR5 231 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 PANX2Q96RD6 677 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 CCPG1Q9ULG6 757 aa9.15□□□□□ -0.95
PTPDC1-204ENST00000620992 MFAP3LO75121 409 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 RFX1P22670 979 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 CUL4BQ13620 913 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 SLC35F6Q8N357 371 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 RABGGTAQ92696 567 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 SHISA4Q96DD7 197 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 ADD3Q9UEY8 706 aaKnown RBP9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 DNM3Q9UQ16 869 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 SASH3O75995 380 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 PAK1Q13153 545 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 KRT31Q15323 416 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 SEPT14Q6ZU15 432 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 ELOA2Q8IYF1 753 aaPredicted RBP9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 PPP1R14CQ8TAE6 165 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 CEP290O15078 2479 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 DLATP10515 647 aaKnown RBP9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 DPYDQ12882 1025 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 PPP2R5BQ15173 497 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 GDAQ9Y2T3 454 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 IKBKGQ9Y6K9 419 aa9.14□□□□□ -0.95
PTPDC1-204ENST00000620992 TBC1D8O95759 1140 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CYP2D6P10635 497 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 LONRF2Q1L5Z9 754 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 DALRD3Q5D0E6 543 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 RNF187Q5TA31 235 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 BSPRYQ5W0U4 402 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SRBD1Q8N5C6 995 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 PYM1Q9BRP8 204 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 NAA15Q9BXJ9 866 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 PCDHA12Q9UN75 941 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 PTPRZ1P23471 2315 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 BCL9O00512 1426 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 LRRIQ4A6NIV6 560 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 GYPCP04921 128 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 VEGFAP15692 232 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SPAG1Q07617 926 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 TROAPQ12815 778 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 STRN3Q13033 797 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 XKR9Q5GH70 373 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 TMTC3Q6ZXV5 915 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SRGAP1Q7Z6B7 1085 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 ARHGEF1Q92888 912 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 GJA10Q969M2 543 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CALCOCO1Q9P1Z2 691 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CEP83Q9Y592 693 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SYNJ2BP-COX16A0A087WUM0 186 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 KCNJ18B7U540 433 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SCG2P13521 617 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 MRPS9P82933 396 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 KCNJ12Q14500 433 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CEP112Q8N8E3 955 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 COX16Q9P0S2 106 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 SERPINB13Q9UIV8 391 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CDC23Q9UJX2 597 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 XDHP47989 1333 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms