RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 STMN2Q93045 179 aa12.45□□□□□ -0.42
CLIP1-219ENST00000620786 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
CLIP1-219ENST00000620786 COL15A1P39059 1388 aa12.45□□□□□ -0.42
CLIP1-219ENST00000620786 MEIS1O00470 390 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 RNF8O76064 485 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 GKAP1Q5VSY0 366 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 NT5C1BQ96P26 610 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 MAGEF1Q9HAY2 307 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 ESYT2A0FGR8 921 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 EBAG9O00559 213 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 ANXA13P27216 316 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PTK2Q05397 1052 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 KAZNQ674X7 775 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 RNF26Q9BY78 433 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PLEKHA4Q9H4M7 779 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 SASH1O94885 1247 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PTPROQ16827 1216 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 RIC8AQ9NPQ8 531 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CYP2D7A0A087X1C5 515 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 GCFC2P16383 781 aaKnown RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CACNB3P54284 484 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PAK2Q13177 524 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 TSTA3Q13630 321 aaPredicted RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CCDC68Q9H2F9 335 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 KIAA1468Q9P260 1216 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 BUB1O43683 1085 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CMA1P23946 247 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 MNAT1P51948 309 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 OSTNP61366 133 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 RNF207Q6ZRF8 634 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CROCCP2Q86T23 111 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CCDC51Q96ER9 411 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PUS7LQ9H0K6 701 aaKnown RBP12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PCIF1Q9H4Z3 704 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 PLCB1Q9NQ66 1216 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
CLIP1-219ENST00000620786 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ADCY8P40145 1251 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 TFAMQ00059 246 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 HLFQ16534 295 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 SDCCAG8Q86SQ7 713 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 BBS5Q8N3I7 341 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 IPO11Q9UI26 975 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 KCNK3O14649 394 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 PSMC2P35998 433 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 LSG1Q9H089 658 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 RFX6Q8HWS3 928 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 TAB3Q8N5C8 712 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 P3H4Q92791 437 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 WRNIP1Q96S55 665 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 FOXP1Q9H334 677 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 OVOS2A0A0G2JMS6 1433 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 GH2P01242 217 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ELF1P32519 619 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 PHBP35232 272 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ZNF131P52739 623 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 APOA5Q6Q788 366 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 TMEM179Q6ZVK1 233 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 BPIFB4P59827 614 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
CLIP1-219ENST00000620786 SCYL1Q96KG9 808 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 PREX2Q70Z35 1606 aa12.43□□□□□ -0.42
CLIP1-219ENST00000620786 ABCD1P33897 745 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 MICALL1Q8N3F8 863 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 FAM49AQ9H0Q0 323 aaPredicted RBP12.42□□□□□ -0.42
CLIP1-219ENST00000620786 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 H7C0C1 242 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 ASNSP08243 561 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 ATP5OP48047 213 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 MYO1EQ12965 1108 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 APOBEC3FQ8IUX4 373 aaKnown RBP12.42□□□□□ -0.42
CLIP1-219ENST00000620786 TRIML1Q8N9V2 468 aa12.42□□□□□ -0.42
CLIP1-219ENST00000620786 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms