RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 RILPQ96NA2 401 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 CARD6Q9BX69 1037 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 H7C0C1 242 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 SRGAP2BP0DMP2 458 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 MARK3P27448 753 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 ATP5OP48047 213 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 SNAP25P60880 206 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 BFSP1Q12934 665 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 NXNQ6DKJ4 435 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 TAB3Q8N5C8 712 aaPredicted RBP13.51□□□□□ -0.25
COL19A1-205ENST00000620364 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
COL19A1-205ENST00000620364 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 KRIT1O00522 736 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 PSMC2P35998 433 aaKnown RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 PTPROQ16827 1216 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 LARP4BQ92615 738 aaKnown RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 DYNLL2Q96FJ2 89 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 ROBO2Q9HCK4 1378 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 USP17L8P0C7I0 530 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 BPIFB4P59827 614 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 KRBA2Q6ZNG9 492 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 RASGRP4Q8TDF6 673 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 HGSO14964 777 aaPredicted RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 ELF1P32519 619 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 GARSP41250 739 aaKnown RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 PPARDQ03181 441 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 MAP7D3Q8IWC1 876 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 COA7Q96BR5 231 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 SLC38A10Q9HBR0 1119 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 HEXIM1O94992 359 aaKnown RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 GSTA1P08263 222 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 GSTA2P09210 222 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 EXOC3L4Q17RC7 722 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 PRKAB2O43741 272 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
COL19A1-205ENST00000620364 SCRN1Q12765 414 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 MGARPQ8TDB4 240 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
COL19A1-205ENST00000620364 LMNB1P20700 586 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 GBP1P32455 592 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ZNF449Q6P9G9 518 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ARHGEF2Q92974 986 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 STK25O00506 426 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 KRT10P13645 584 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 TRIM58Q8NG06 486 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 TBCKQ8TEA7 893 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 MEIS1O00470 390 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 OSTNP61366 133 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 KIAA1468Q9P260 1216 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 KIF1BO60333 1816 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 WDR46O15213 610 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ECE2O60344 883 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 CMA1P23946 247 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 XPO4Q9C0E2 1151 aaKnown RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 RNF181Q9P0P0 153 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ECE1P42892 770 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
COL19A1-205ENST00000620364 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 OR8K1Q8NGG5 319 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 USP28Q96RU2 1077 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 NUF2Q9BZD4 464 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
COL19A1-205ENST00000620364 MED7O43513 233 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 ATF2P15336 505 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 GCFC2P16383 781 aaKnown RBP13.48□□□□□ -0.25
COL19A1-205ENST00000620364 UBE2SQ16763 222 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 TRIML1Q8N9V2 468 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 CAPN12Q6ZSI9 719 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 RPS6KA4O75676 772 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 CRKP46108 304 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 RNF207Q6ZRF8 634 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 TTC30AQ86WT1 665 aa13.48□□□□□ -0.25
COL19A1-205ENST00000620364 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms