RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 PRPHP41219 470 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 DGKHQ86XP1 1220 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 ADSSL1Q8N142 457 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 STIM2Q9P246 746 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 FEZ2Q9UHY8 353 aaPredicted RBP13.57□□□□□ -0.24
SPCS1-206ENST00000619898 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
SPCS1-206ENST00000619898 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
SPCS1-206ENST00000619898 DIXDC1Q155Q3 683 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PIGSQ96S52 555 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 NNTQ13423 1086 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PLS1Q14651 629 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 GNA14O95837 355 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 SARSP49591 514 aaKnown RBP13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PDCLQ13371 301 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 ADAM9Q13443 819 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PSD3Q9NYI0 1048 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 ARMCX3Q9UH62 379 aaPredicted RBP13.56□□□□□ -0.24
SPCS1-206ENST00000619898 USP21Q9UK80 565 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 NFU1Q9UMS0 254 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 FAM208AQ9UK61 1670 aaKnown RBP13.56□□□□□ -0.24
SPCS1-206ENST00000619898 KRIT1O00522 736 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 KCNQ4P56696 695 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
SPCS1-206ENST00000619898 PLCD4Q9BRC7 762 aa13.56□□□□□ -0.24
SPCS1-206ENST00000619898 XDHP47989 1333 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 FCER1AP12319 257 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 EZRP15311 586 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 EMBQ6PCB8 327 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 STAG2Q8N3U4 1231 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 NCK2O43639 380 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 U2AF1L4Q8WU68 220 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 COA7Q96BR5 231 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 NAP1L4Q99733 375 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 DPH5Q9H2P9 285 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 LRRC53A6NM62 1247 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 TNFAIP3P21580 790 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 BTDP43251 543 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 TNIP1Q15025 636 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 ANKRD40Q6AI12 368 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 MSANTD4Q8NCY6 345 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 HPS3Q969F9 1004 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 SH3GLB2Q9NR46 395 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
SPCS1-206ENST00000619898 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
SPCS1-206ENST00000619898 VIMP08670 466 aaKnown RBP13.54□□□□□ -0.24
SPCS1-206ENST00000619898 APBA1Q02410 837 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 OSBPL9Q96SU4 736 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 ADAMTS1Q9UHI8 967 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 DDX25Q9UHL0 483 aaKnown RBP13.54□□□□□ -0.24
SPCS1-206ENST00000619898 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 CALUO43852 315 aaPredicted RBP13.54□□□□□ -0.24
SPCS1-206ENST00000619898 KIF4AO95239 1232 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 GCNT3O95395 438 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 ABCB4P21439 1286 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 MDM2Q00987 491 aaPredicted RBP13.54□□□□□ -0.24
SPCS1-206ENST00000619898 TROAPQ12815 778 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 ALS2CLQ60I27 953 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 KIAA1024Q9UPX6 916 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 COL4A3BPQ9Y5P4 624 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 A0A0U1RQJ8 604 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 KCNB1Q14721 858 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 E2F4Q16254 413 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
SPCS1-206ENST00000619898 MFSD14BQ5SR56 506 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 TADA2BQ86TJ2 420 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 SAMD15Q9P1V8 674 aa13.54□□□□□ -0.24
SPCS1-206ENST00000619898 CETN2P41208 172 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 MTMR3Q13615 1198 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 ADAT2Q7Z6V5 191 aaKnown RBP13.53□□□□□ -0.24
SPCS1-206ENST00000619898 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 LRRC1Q9BTT6 524 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
SPCS1-206ENST00000619898 KDM3AQ9Y4C1 1321 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms