RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 PYM1Q9BRP8 204 aaKnown RBP11.54□□□□□ -0.56
TP53-225ENST00000619485 SYF2O95926 243 aaKnown RBP11.54□□□□□ -0.56
TP53-225ENST00000619485 CXCR5P32302 372 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 DNA2P51530 1060 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 PFKFB3Q16875 520 aaPredicted RBP11.54□□□□□ -0.56
TP53-225ENST00000619485 MFSD14BQ5SR56 506 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 EXOC1Q9NV70 894 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 NAV1Q8NEY1 1877 aa11.54□□□□□ -0.56
TP53-225ENST00000619485 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 EIF3CLB5ME19 914 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 PDE2AO00408 941 aaPredicted RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 TUBBP07437 444 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 PLEKP08567 350 aaPredicted RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 TFAP4Q01664 338 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 CKAP4Q07065 602 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 PICALMQ13492 652 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 TTC19Q6DKK2 380 aaPredicted RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 DNAJC7Q99615 494 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 SELENOOQ9BVL4 669 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 CRNKL1Q9BZJ0 848 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 KAT14Q9H8E8 782 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 ASIC1P78348 528 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 SLC7A5Q01650 507 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 KIF5AQ12840 1032 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 NAALADL2Q58DX5 795 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 CNOT6LQ96LI5 555 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 CCDC42Q96M95 316 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 NOC4LQ9BVI4 516 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 DEF6Q9H4E7 631 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 DBNDD1Q9H9R9 158 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 DDX4Q9NQI0 724 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
TP53-225ENST00000619485 PDS5AQ29RF7 1337 aaKnown RBP11.53□□□□□ -0.56
TP53-225ENST00000619485 SCN9AQ15858 1988 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 MCM3P25205 808 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 EEF1GP26641 437 aaKnown RBP11.52□□□□□ -0.56
TP53-225ENST00000619485 TRAPPC10P48553 1259 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 DNM2P50570 870 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 EIF6P56537 245 aaKnown RBP11.52□□□□□ -0.56
TP53-225ENST00000619485 PDE4DQ08499 809 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 SPA17Q15506 151 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 EZH2Q15910 746 aaKnown RBP11.52□□□□□ -0.56
TP53-225ENST00000619485 C12orf60Q5U649 245 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 POTEAQ6S8J7 498 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.56
TP53-225ENST00000619485 FAM207AQ9NSI2 230 aaPredicted RBP11.52□□□□□ -0.56
TP53-225ENST00000619485 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 GOLGA6BA6NDN3 693 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
TP53-225ENST00000619485 FGRP09769 529 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 FCER1AP12319 257 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 CALML3P27482 149 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 KIF5BP33176 963 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.57
TP53-225ENST00000619485 RHBDL3P58872 404 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 CCDC70Q6NSX1 233 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 SND1Q7KZF4 910 aaKnown RBP eCLIP11.52□□□□□ -0.57
TP53-225ENST00000619485 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 HDAC7Q8WUI4 952 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
TP53-225ENST00000619485 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 NRXN2Q9P2S2 1712 aa11.52□□□□□ -0.57
TP53-225ENST00000619485 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 SRGNP10124 158 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
TP53-225ENST00000619485 LETM2Q2VYF4 491 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 ARL6IP4Q66PJ3 421 aaKnown RBP11.51□□□□□ -0.57
TP53-225ENST00000619485 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 ZNF804AQ7Z570 1209 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 ZNF507Q8TCN5 953 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 RRP36Q96EU6 259 aaKnown RBP11.51□□□□□ -0.57
TP53-225ENST00000619485 THAP9Q9H5L6 903 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 EHD2Q9NZN4 543 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 SLX4Q8IY92 1834 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 MOCS3O95396 460 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 PLCG1P19174 1290 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 ATP2B2Q01814 1243 aa11.51□□□□□ -0.57
TP53-225ENST00000619485 STK4Q13043 487 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms