RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 PXMP2Q9NR77 195 aa20.89■□□□□ 0.93
MALAT1-215ENST00000619449 SH2B1Q9NRF2 756 aaPredicted RBP20.89■□□□□ 0.93
MALAT1-215ENST00000619449 DTNBO60941 627 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 CDKL5O76039 1030 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 MYCP01106 439 aaPredicted RBP20.88■□□□□ 0.93
MALAT1-215ENST00000619449 NAPAP54920 295 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 LHX8Q68G74 356 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 TRIM22Q8IYM9 498 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 NSUN6Q8TEA1 469 aaKnown RBP20.88■□□□□ 0.93
MALAT1-215ENST00000619449 RMDN3Q96TC7 470 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 RNF208Q9H0X6 261 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
MALAT1-215ENST00000619449 POTEFA5A3E0 1075 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 ADAMTS3O15072 1205 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 CLK2P49760 499 aaKnown RBP20.87■□□□□ 0.93
MALAT1-215ENST00000619449 AKAP17AQ02040 695 aaKnown RBP20.87■□□□□ 0.93
MALAT1-215ENST00000619449 ACVR2BQ13705 512 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 AIFM3Q96NN9 605 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 IWS1Q96ST2 819 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 PDCD2LQ9BRP1 358 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 CRISPLD2Q9H0B8 497 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 SH3GLB2Q9NR46 395 aa20.87■□□□□ 0.93
MALAT1-215ENST00000619449 KIAA0100Q14667 2235 aaKnown RBP20.86■□□□□ 0.93
MALAT1-215ENST00000619449 SMCO2A6NFE2 343 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 SEPT4O43236 478 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 GJA8P48165 433 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 NPY5RQ15761 445 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 UBE2SQ16763 222 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 TAPT1Q6NXT6 567 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 FAM177A1Q8N128 213 aaPredicted RBP20.86■□□□□ 0.93
MALAT1-215ENST00000619449 CUL5Q93034 780 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 CNPY2Q9Y2B0 182 aa20.86■□□□□ 0.93
MALAT1-215ENST00000619449 RBM47A0AV96 593 aaKnown RBP20.85■□□□□ 0.93
MALAT1-215ENST00000619449 CCDC85CA6NKD9 419 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 ADCY6O43306 1168 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 JAK2O60674 1132 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 SGPL1O95470 568 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 MCM2P49736 904 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 IL31RAQ8NI17 732 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 TMX3Q96JJ7 454 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
MALAT1-215ENST00000619449 VTA1Q9NP79 307 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 VPS54Q9P1Q0 977 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 DDX20Q9UHI6 824 aaKnown RBP20.85■□□□□ 0.93
MALAT1-215ENST00000619449 FRMPD3Q5JV73 1810 aa20.85■□□□□ 0.93
MALAT1-215ENST00000619449 NR3C2P08235 984 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 EIF2AK2P19525 551 aaKnown RBP20.84■□□□□ 0.93
MALAT1-215ENST00000619449 KCNA4P22459 653 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 ADCY7P51828 1080 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 MRPL12P52815 198 aaKnown RBP20.84■□□□□ 0.93
MALAT1-215ENST00000619449 PGM5Q15124 567 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 ARHGEF16Q5VV41 709 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 VSIG10LQ86VR7 867 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
MALAT1-215ENST00000619449 CCDC12Q8WUD4 166 aaPredicted RBP20.84■□□□□ 0.93
MALAT1-215ENST00000619449 DEFB118Q96PH6 123 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 TMEM106CQ9BVX2 250 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 GLT8D2Q9H1C3 349 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
MALAT1-215ENST00000619449 OGDHLQ9ULD0 1010 aa20.84■□□□□ 0.93
MALAT1-215ENST00000619449 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.93
MALAT1-215ENST00000619449 FBXO16Q8IX29 292 aaPredicted RBP20.83■□□□□ 0.93
MALAT1-215ENST00000619449 PDGFCQ9NRA1 345 aa20.83■□□□□ 0.93
MALAT1-215ENST00000619449 MKI67P46013 3256 aaKnown RBP20.82■□□□□ 0.92
MALAT1-215ENST00000619449 B4DLN1 442 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 M0R2N6 131 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 MSCO60682 206 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 RGS20O76081 388 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 AKR1A1P14550 325 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 CAPN2P17655 700 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 MNX1P50219 401 aaPredicted RBP20.82■□□□□ 0.92
MALAT1-215ENST00000619449 MRPS9P82933 396 aaKnown RBP20.82■□□□□ 0.92
MALAT1-215ENST00000619449 PDE4DQ08499 809 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 CCDC148Q8NFR7 591 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 MPHOSPH6Q99547 160 aaKnown RBP20.82■□□□□ 0.92
MALAT1-215ENST00000619449 ZHX1Q9UKY1 873 aaPredicted RBP20.82■□□□□ 0.92
MALAT1-215ENST00000619449 PCDHA6Q9UN73 950 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 PCDHA8Q9Y5H6 950 aa20.82■□□□□ 0.92
MALAT1-215ENST00000619449 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.81■□□□□ 0.92
MALAT1-215ENST00000619449 EN2P19622 333 aaPredicted RBP20.81■□□□□ 0.92
MALAT1-215ENST00000619449 CNGA1P29973 690 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 SOX10P56693 466 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 STXBP2Q15833 593 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 TMEM63BQ5T3F8 832 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 EEPD1Q7L9B9 569 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 DAGLBQ8NCG7 672 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 CRYGNQ8WXF5 182 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 PHF20Q9BVI0 1012 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 C6orf50Q9HD87 102 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 TMEM260Q9NX78 707 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
MALAT1-215ENST00000619449 GNEQ9Y223 722 aaKnown RBP20.81■□□□□ 0.92
MALAT1-215ENST00000619449 KIAA1217Q5T5P2 1943 aa20.8■□□□□ 0.92
MALAT1-215ENST00000619449 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
MALAT1-215ENST00000619449 FOSP01100 380 aaPredicted RBP20.8■□□□□ 0.92
MALAT1-215ENST00000619449 GNA11P29992 359 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms