RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	PNMA6F	A0A0J9YX94	578 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	ESYT2	A0FGR8	921 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	CTAGE15	A4D2H0	777 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	RCCD1	A6NED2	376 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	CTAGE8	P0CG41	777 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	ZNF543	Q08ER8	600 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.5	□□□□□ -0.41
TP53-223	ENST00000618944	CTAGE6	Q86UF2	777 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	CTAGE4	Q8IX94	777 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	LARP4B	Q92615	738 aa	Known RBP	12.5	□□□□□ -0.41
TP53-223	ENST00000618944	FUT8	Q9BYC5	575 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	COA1	Q9GZY4	146 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	AFF2	P51816	1311 aa		12.5	□□□□□ -0.41
TP53-223	ENST00000618944	ERICH4	A6NGS2	130 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	SSB	P05455	408 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	SHMT1	P34896	483 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	FXR2	P51116	673 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	TCP10	Q12799	353 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	NFIA	Q12857	509 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	SMC1A	Q14683	1233 aa	Known RBP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	FKBP15	Q5T1M5	1219 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	KRT79	Q5XKE5	535 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	CDC42EP5	Q6NZY7	148 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	FAM114A1	Q8IWE2	563 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	NOA1	Q8NC60	698 aa	Known RBP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	DDX12P	Q92771	950 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	TTYH3	Q9C0H2	523 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	LACRT	Q9GZZ8	138 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	PCDHAC2	Q9Y5I4	1007 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	NAV1	Q8NEY1	1877 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	IGKV6D-41	A0A0C4DH26	115 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	KIF20A	O95235	890 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	PLEK	P08567	350 aa	Predicted RBP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	SNHG28	P0DPA3	235 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	NUP58	Q9BVL2	599 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	SUGCT	Q9HAC7	445 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	MYO1A	Q9UBC5	1043 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	DDX25	Q9UHL0	483 aa	Known RBP	12.49	□□□□□ -0.41
TP53-223	ENST00000618944	ATP6V0A2	Q9Y487	856 aa		12.49	□□□□□ -0.41
TP53-223	ENST00000618944	ATP1A1	P05023	1023 aa	Known RBP	12.48	□□□□□ -0.41
TP53-223	ENST00000618944	ZBED6	P86452	979 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	SEMA3F	Q13275	785 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	TUBB2A	Q13885	445 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	CENPP	Q6IPU0	288 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	UNC13D	Q70J99	1090 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	RAD54L	Q92698	747 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	JAKMIP2	Q96AA8	810 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	CAPZA3	Q96KX2	299 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	TUBB2B	Q9BVA1	445 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	HAUS4	Q9H6D7	363 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	MMRN2	Q9H8L6	949 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	PSTPIP2	Q9H939	334 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	RIC8A	Q9NPQ8	531 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	RNF216	Q9NWF9	866 aa	Predicted RBP	12.48	□□□□□ -0.41
TP53-223	ENST00000618944	TBC1D7	Q9P0N9	293 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	NHS	Q6T4R5	1651 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	MYH8	P13535	1937 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	MACROD2	A1Z1Q3	448 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	CCDC151	A5D8V7	595 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L15	C9J2P7	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L13	C9JLJ4	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L11	C9JVI0	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L18	D6R9N7	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L22	D6RA61	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L17	D6RBQ6	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L19	D6RCP7	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L20	D6RJB6	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	EPHB6	O15197	1021 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	ATP8B1	O43520	1251 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	OAS2	P29728	719 aa	Known RBP	12.48	□□□□□ -0.41
TP53-223	ENST00000618944	GYS2	P54840	703 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	SNAP25	P60880	206 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	KRT83	P78385	493 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	AMPD2	Q01433	879 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L24	Q0WX57	530 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	PDIA5	Q14554	519 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	BRD3	Q15059	726 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	MEA1	Q16626	185 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	WHAMMP3	Q1A5X7	153 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	VWA3B	Q502W6	1294 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	USP17L6P	Q6QN14	398 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	KRT26	Q7Z3Y9	468 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	HAS1	Q92839	578 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	RAB34	Q9BZG1	259 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	ABCB6	Q9NP58	842 aa		12.48	□□□□□ -0.41
TP53-223	ENST00000618944	CYLC1	P35663	651 aa	Predicted RBP	12.47	□□□□□ -0.41
TP53-223	ENST00000618944	CACNB1	Q02641	598 aa	Predicted RBP	12.47	□□□□□ -0.41
TP53-223	ENST00000618944	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.47	□□□□□ -0.41
TP53-223	ENST00000618944	CCDC155	Q8N6L0	562 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	CUL5	Q93034	780 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	NDST4	Q9H3R1	872 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	STK17A	Q9UEE5	414 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	hCG_1984214	I3L0E3	225 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	IPO7	O95373	1038 aa	Known RBP	12.47	□□□□□ -0.41
TP53-223	ENST00000618944	MRPL12	P52815	198 aa	Known RBP	12.47	□□□□□ -0.41
TP53-223	ENST00000618944	VSNL1	P62760	191 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	RAD51AP2	Q09MP3	1159 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	C2CD5	Q86YS7	1000 aa		12.47	□□□□□ -0.41
TP53-223	ENST00000618944	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms