RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CNOT7Q9UIV1 285 aaKnown RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 PCDHA6Q9UN73 950 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 PCDHA8Q9Y5H6 950 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 CTNNA2P26232 953 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 GBP2P32456 591 aaPredicted RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 PRPHP41219 470 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 DDR1Q08345 913 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 RASA3Q14644 834 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 SLC9C1Q4G0N8 1177 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 ZNF70Q9UC06 446 aaPredicted RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 CYP2J2P51589 502 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 ADKP55263 362 aaKnown RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 TSGA10Q9BZW7 698 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 ARMCX3Q9UH62 379 aaPredicted RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 K7ENM7 598 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 HLTFQ14527 1009 aaKnown RBP eCLIP15.35■□□□□ 0.05
CIITA-213ENST00000618327 MCM6Q14566 821 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 ASIC2Q16515 512 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 ZNF658Q5TYW1 1059 aaPredicted RBP15.35■□□□□ 0.05
CIITA-213ENST00000618327 CLEC10AQ8IUN9 316 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 EEF2KMTQ96G04 330 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 SELENOOQ9BVL4 669 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 GOLPH3LQ9H4A5 285 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
CIITA-213ENST00000618327 IFFO1Q0D2I5 559 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 IQCDQ96DY2 449 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 CTDNEP1O95476 244 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 EIF2AK2P19525 551 aaKnown RBP15.34■□□□□ 0.05
CIITA-213ENST00000618327 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 DHTKD1Q96HY7 919 aaPredicted RBP15.34■□□□□ 0.05
CIITA-213ENST00000618327 CDHR1Q96JP9 859 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
CIITA-213ENST00000618327 TMEM260Q9NX78 707 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 FDPSP14324 419 aaKnown RBP15.34■□□□□ 0.05
CIITA-213ENST00000618327 ADAM9Q13443 819 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 FMR1NBQ8N0W7 255 aaPredicted RBP15.34■□□□□ 0.05
CIITA-213ENST00000618327 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 GOLGA5Q8TBA6 731 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 ATP6V0A1Q93050 837 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 NACC1Q96RE7 527 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 HPS5Q9UPZ3 1129 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 MEIS1O00470 390 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 NEBLO76041 1014 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 KRT5P13647 590 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
CIITA-213ENST00000618327 IL1R1P14778 569 aa15.33■□□□□ 0.05
CIITA-213ENST00000618327 U2AF2P26368 475 aaKnown RBP eCLIP15.33■□□□□ 0.05
CIITA-213ENST00000618327 MNAT1P51948 309 aa15.33■□□□□ 0.05
CIITA-213ENST00000618327 CCDC51Q96ER9 411 aa15.33■□□□□ 0.05
CIITA-213ENST00000618327 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.05
CIITA-213ENST00000618327 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
CIITA-213ENST00000618327 COBLO75128 1261 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 TNFAIP3P21580 790 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 CCND2P30279 289 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 NLRC4Q9NPP4 1024 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 NYAP2Q9P242 653 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 DPH6Q7L8W6 267 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.04
CIITA-213ENST00000618327 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 OR8K1Q8NGG5 319 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 KIFAP3Q92845 792 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 RRAGAQ7L523 313 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 P2RX5Q93086 422 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 PHF20Q9BVI0 1012 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 NRBP2Q9NSY0 501 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 ARHGAP4P98171 946 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 TRPC3Q13507 836 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 SMC1AQ14683 1233 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 SEPT14Q6ZU15 432 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 RGS22Q8NE09 1264 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 ENOX1Q8TC92 643 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 HOXC10Q9NYD6 342 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 PLA2G4BP0C869 781 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 COPB1P53618 953 aaKnown RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 GJA10Q969M2 543 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 RTFDC1Q9BY42 306 aaPredicted RBP15.32■□□□□ 0.04
CIITA-213ENST00000618327 NOD1Q9Y239 953 aa15.32■□□□□ 0.04
CIITA-213ENST00000618327 POLGP54098 1239 aaPredicted RBP15.31■□□□□ 0.04
CIITA-213ENST00000618327 KLHL30Q0D2K2 578 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 LRMPQ12912 555 aa15.31■□□□□ 0.04
CIITA-213ENST00000618327 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms