RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RASSF7Q02833 373 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ST3GAL1Q11201 340 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 SLC4A8Q2Y0W8 1093 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 SMYD4Q8IYR2 804 aaPredicted RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ABCA6Q8N139 1617 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ZFAND2BQ8WV99 257 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 STAMQ92783 540 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 NAP1L3Q99457 506 aaPredicted RBP8.08□□□□□ -1.12
PDE6A-205ENST00000617647 NKIRAS1Q9NYS0 192 aa8.08□□□□□ -1.12
PDE6A-205ENST00000617647 ZMYM6O95789 1325 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 A0A0D9SFI3 127 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 EIF4BP23588 611 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 DHX9Q08211 1270 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ADCY1Q08828 1119 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CCDC15Q0P6D6 951 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PTPROQ16827 1216 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PI16Q6UXB8 463 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CASP10Q92851 521 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ABHD8Q96I13 439 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 SLC5A4Q9NY91 659 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PDP2Q9P2J9 529 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 RABGAP1Q9Y3P9 1069 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 YTHDC2Q9H6S0 1430 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 YEATS2Q9ULM3 1422 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 NSD2O96028 1365 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ANO9A1A5B4 782 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 SPECC1L-ADORA2AF8WAN1 911 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PSMD14O00487 310 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 TRAPPC3O43617 180 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 NPTXRO95502 500 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CYP11B2P19099 503 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 COPS2P61201 443 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PDE4BQ07343 736 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 MCL1Q07820 350 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CYLC2Q14093 348 aaPredicted RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 MYBPC3Q14896 1274 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 TMEM139Q8IV31 216 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 GSDMBQ8TAX9 411 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ATP6V0A1Q93050 837 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 NMD3Q96D46 503 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 TRAPPC9Q96Q05 1148 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 RANBP17Q9H2T7 1088 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 PA2G4Q9UQ80 394 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 MAGEA13PA6NCF6 341 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 KCNJ18B7U540 433 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 NCK2O43639 380 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 SLCO1A2P46721 670 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 COPB1P53618 953 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 FMR1Q06787 632 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 KCNJ12Q14500 433 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 TAF7Q15545 349 aaPredicted RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CCDC152Q4G0S7 254 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 SMCR8Q8TEV9 937 aaPredicted RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ANKRD27Q96NW4 1050 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 RMND1Q9NWS8 449 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 EHD2Q9NZN4 543 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 UTP11Q9Y3A2 253 aaKnown RBP8.07□□□□□ -1.12
PDE6A-205ENST00000617647 EMILIN1Q9Y6C2 1016 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 EFCAB6Q5THR3 1501 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ADCY9O60503 1353 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 ADGRF5Q8IZF2 1346 aa8.07□□□□□ -1.12
PDE6A-205ENST00000617647 DNAJC6O75061 913 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 KRT38O76015 456 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 SP100P23497 879 aaPredicted RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 IARSP41252 1262 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ARID5AQ03989 594 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 PDIA5Q14554 519 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 SLC39A14Q15043 492 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 HSP90AA5PQ58FG0 334 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 DDX46Q7L014 1031 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 MICU3Q86XE3 530 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 SCYL3Q8IZE3 742 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 DTX3LQ8TDB6 740 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 CATSPER2Q96P56 530 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 WDR37Q9Y2I8 494 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 SH3GLB1Q9Y371 365 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 UGGT1Q9NYU2 1555 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 CCDC169A6NNP5 214 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 A8MUI8 341 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 IPO5O00410 1097 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 FOXN1O15353 648 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ADCY3O60266 1144 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ATP9AO75110 1047 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 CAPN15O75808 1086 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ABL1P00519 1130 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 POTEJP0CG39 1038 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 CHN1P15882 459 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ERCC5P28715 1186 aaPredicted RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ADARP55265 1226 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 ADAM9Q13443 819 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 NR1I3Q14994 352 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 GET4Q7L5D6 327 aaPredicted RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 LRRC34Q8IZ02 419 aa8.06□□□□□ -1.12
PDE6A-205ENST00000617647 PHAXQ9H814 394 aaKnown RBP8.06□□□□□ -1.12
PDE6A-205ENST00000617647 THRAP3Q9Y2W1 955 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms