RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 RPS6KC1Q96S38 1066 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 DCTPP1Q9H773 170 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 PCDHB4Q9Y5E5 795 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 SNX14Q9Y5W7 946 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 H2AFZP0C0S5 128 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 PTPREP23469 700 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 NSUN2Q08J23 767 aaKnown RBP eCLIP6.52□□□□□ -1.37
RFX3-212ENST00000617270 ADAM9Q13443 819 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 SLMAPQ14BN4 828 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 ARMCX5Q6P1M9 558 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 H2AFVQ71UI9 128 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 ST13P4Q8IZP2 240 aaPredicted RBP6.52□□□□□ -1.37
RFX3-212ENST00000617270 GPKOWQ92917 476 aaPredicted RBP eCLIP6.52□□□□□ -1.37
RFX3-212ENST00000617270 UPF3AQ9H1J1 476 aaKnown RBP6.52□□□□□ -1.37
RFX3-212ENST00000617270 SLC38A10Q9HBR0 1119 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 ZSCAN32Q9NX65 697 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
RFX3-212ENST00000617270 hCG_2014768A0A024R1R8 64 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 EYA2O00167 538 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TLR3O15455 904 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 HSPD1P10809 573 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 HADHAP40939 763 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 OCA2Q04671 838 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KCNA1Q09470 495 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TTC30AQ86WT1 665 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 DNAJC6O75061 913 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KPNA2P52292 529 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 ING2Q9H160 280 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KIF17Q9P2E2 1029 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 NOS1P29475 1434 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 UBAP1LF5GYI3 381 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 ECEL1O95672 775 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 CHEK2O96017 543 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 MT-ND3P03897 115 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TCP1P17987 556 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 KCNA4P22459 653 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 NEK2P51955 445 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 SGO2Q562F6 1265 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 RNF207Q6ZRF8 634 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 SNX19Q92543 992 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFX3-212ENST00000617270 MCF2LO15068 1137 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 DHX9Q08211 1270 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 DARS2Q6PI48 645 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 RUNDC3BQ96NL0 473 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 H0Y3Z8 333 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KRT14P02533 472 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 CCDC159P0C7I6 412 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 HSPA6P17066 643 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 DEPDC1BQ8WUY9 529 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 MYO1FO00160 1098 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 EPHB1P54762 984 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TFAP4Q01664 338 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 E2F4Q16254 413 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 ABI1Q8IZP0 508 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TSPYL6Q8N831 410 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KIFC3Q9BVG8 833 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 TRIM15Q9C019 465 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 PSTPIP2Q9H939 334 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 KCNG1Q9UIX4 513 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 CREB3O43889 395 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 LMNAP02545 664 aaKnown RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 PTK2BQ14289 1009 aa6.51□□□□□ -1.37
RFX3-212ENST00000617270 CCNL1Q9UK58 526 aaPredicted RBP6.51□□□□□ -1.37
RFX3-212ENST00000617270 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFX3-212ENST00000617270 EXOC1LA0A1B0GW35 172 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 ZSCAN9O15535 394 aaPredicted RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 PSMC1P62191 440 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 CATSPER3Q86XQ3 398 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 CCDC90BQ9GZT6 254 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 MAP3K5Q99683 1374 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 ZNF532Q9HCE3 1301 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 HECW1Q76N89 1606 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 PI4K2BG5E9Z4 385 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 TADA3O75528 432 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 PLS3P13797 630 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 FAM180AQ6UWF9 173 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 MAGOHBQ96A72 148 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 SERPINI1Q99574 410 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 TTC1Q99614 292 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 CALN1Q9BXU9 219 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 DDX28Q9NUL7 540 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 SUN2Q9UH99 717 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 H0YCG3 227 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 SEC24BO95487 1268 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 APBA1Q02410 837 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 CYP4A11Q02928 519 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 APPBP2Q92624 585 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 THOC1Q96FV9 657 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 TSC22D3Q99576 134 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 DDX25Q9UHL0 483 aaKnown RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 TRIM37O94972 964 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 ZFXP17010 805 aaPredicted RBP6.5□□□□□ -1.37
RFX3-212ENST00000617270 KLC3Q6P597 504 aa6.5□□□□□ -1.37
RFX3-212ENST00000617270 KCTD6Q8NC69 237 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms