RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 SEL1LQ9UBV2 794 aa17■□□□□ 0.31
NOP56-220ENST00000616692 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
NOP56-220ENST00000616692 TMCC1O94876 653 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 LUC7L3O95232 432 aaKnown RBP16.99■□□□□ 0.31
NOP56-220ENST00000616692 SLC10A3P09131 477 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
NOP56-220ENST00000616692 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 C6orf229H3BNL8 230 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 ENPP1P22413 925 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 WHAMMP3Q1A5X7 153 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 ZNF570Q96NI8 536 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 ACTR5Q9H9F9 607 aaPredicted RBP16.99■□□□□ 0.31
NOP56-220ENST00000616692 C2CD2Q9Y426 696 aa16.99■□□□□ 0.31
NOP56-220ENST00000616692 PCCAP05165 728 aaPredicted RBP16.98■□□□□ 0.31
NOP56-220ENST00000616692 CDC25CP30307 473 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 HOXD12P35452 270 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 NUCB1Q02818 461 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 PPFIA1Q13136 1202 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 DGKZQ13574 1117 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 MAP3K11Q16584 847 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 ANO6Q4KMQ2 910 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 C14orf80Q86SX3 495 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 BECN2A8MW95 431 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 CDC45O75419 566 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
NOP56-220ENST00000616692 SYF2O95926 243 aaKnown RBP16.98■□□□□ 0.31
NOP56-220ENST00000616692 GNAI3P08754 354 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 IDO1P14902 403 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 ARPC4P59998 168 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 GRM1Q13255 1194 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 CCDC121Q6ZUS5 278 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 ABCB6Q9NP58 842 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 CNPY2Q9Y2B0 182 aa16.98■□□□□ 0.31
NOP56-220ENST00000616692 LDHAP00338 332 aaKnown RBP16.97■□□□□ 0.31
NOP56-220ENST00000616692 BDNFP23560 247 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 PSMC4P43686 418 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
NOP56-220ENST00000616692 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
NOP56-220ENST00000616692 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 TRIM65Q6PJ69 517 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
NOP56-220ENST00000616692 FAM89AQ96GI7 184 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 ZNF408Q9H9D4 720 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 ASB3Q9Y575 518 aa16.97■□□□□ 0.31
NOP56-220ENST00000616692 GOLGA8AA7E2F4 631 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 NPTXRO95502 500 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 BCRP11274 1271 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 ATP2B4P23634 1241 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 MCCD1P59942 119 aaPredicted RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 SREK1Q8WXA9 508 aaKnown RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 VIPAS39Q9H9C1 493 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 PIDD1Q9HB75 910 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 TNNQ9UQP3 1299 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 PDE8AO60658 829 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 BPIFB4P59827 614 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 RSBN1LQ6PCB5 846 aaPredicted RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 PI16Q6UXB8 463 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
NOP56-220ENST00000616692 PRELID1Q9Y255 219 aa16.96■□□□□ 0.31
NOP56-220ENST00000616692 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
NOP56-220ENST00000616692 TBC1D10BQ4KMP7 808 aaPredicted RBP16.95■□□□□ 0.3
NOP56-220ENST00000616692 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
NOP56-220ENST00000616692 PODNQ7Z5L7 613 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 GABPB2Q8TAK5 448 aaPredicted RBP16.95■□□□□ 0.3
NOP56-220ENST00000616692 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
NOP56-220ENST00000616692 HPS3Q969F9 1004 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 TIMM22Q9Y584 194 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 FANCGO15287 622 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 CCDC166P0CW27 439 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 MXRA7P84157 204 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 MSANTD4Q8NCY6 345 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 GMLQ99445 158 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 OSBPL1AQ9BXW6 950 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 CCDC68Q9H2F9 335 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 OCEL1Q9H607 264 aa16.95■□□□□ 0.3
NOP56-220ENST00000616692 XDHP47989 1333 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms