RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 GGA1Q9UJY5 639 aa9.6□□□□□ -0.87
TMPRSS4-219ENST00000616579 L1RE1Q9UN81 338 aa9.6□□□□□ -0.87
TMPRSS4-219ENST00000616579 CHD4Q14839 1912 aa9.6□□□□□ -0.87
TMPRSS4-219ENST00000616579 POTEMA6NI47 508 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 USP17L5A8MUK1 530 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 PRPHP41219 470 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 RAD51AP2Q09MP3 1159 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 GRAPQ13588 217 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 GRIK5Q16478 980 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 ZSCAN29Q8IWY8 852 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 CCDC170Q8IYT3 715 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 GRAPLQ8TC17 118 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 HNRNPLLQ8WVV9 542 aaKnown RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 LACRTQ9GZZ8 138 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 LUC7LQ9NQ29 371 aaKnown RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 ITGB4P16144 1822 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 PALM3A6NDB9 673 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 ZNF185O15231 689 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 MRPS25P82663 173 aaKnown RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 CCDC84Q86UT8 332 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 SMCR8Q8TEV9 937 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 DNAJC7Q99615 494 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 ZMYND12Q9H0C1 365 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 DUSP10Q9Y6W6 482 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 SPATA31A5Q5VU36 1347 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 SPATA31A7Q8IWB4 1347 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 KLRC4O43908 158 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 CXCR5P32302 372 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 HERVK_113P62684 666 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 C2orf54Q08AI8 447 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 NELFCDQ8IXH7 590 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 GSPT2Q8IYD1 628 aaKnown RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 TRIM58Q8NG06 486 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 RPGRIP1Q96KN7 1286 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 LRRC27Q9C0I9 530 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 TMX4Q9H1E5 349 aaPredicted RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 NDST4Q9H3R1 872 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 CD209Q9NNX6 404 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 RSPH14Q9UHP6 348 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 REXO2Q9Y3B8 237 aaKnown RBP9.59□□□□□ -0.87
TMPRSS4-219ENST00000616579 STRCQ7RTU9 1775 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 SLIT2O94813 1529 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 TDP2O95551 362 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 VAV2P52735 878 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 GTF2IP78347 998 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 NEDD1Q8NHV4 660 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 FAM71BQ8TC56 605 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 DUSP9Q99956 384 aaKnown RBP9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 SPZ1Q9BXG8 430 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 PSMD14O00487 310 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 MOCS3O95396 460 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 PLEKP08567 350 aaPredicted RBP9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 USP14P54578 494 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 DPP8Q6V1X1 898 aaPredicted RBP9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 C10orf67Q8IYJ2 551 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 DUOX1Q9NRD9 1551 aa9.58□□□□□ -0.88
TMPRSS4-219ENST00000616579 EIF3CLB5ME19 914 aaKnown RBP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MAP2K7O14733 419 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 BUB1O43683 1085 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 ACTN2P35609 894 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 KIF11P52732 1056 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MAN2A1Q16706 1144 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 UBE2SQ16763 222 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 VWA3BQ502W6 1294 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 WDR59Q6PJI9 974 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 SND1Q7KZF4 910 aaKnown RBP eCLIP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 CLEC10AQ8IUN9 316 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 ZNF507Q8TCN5 953 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 AFAP1L1Q8TED9 768 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 EIF3CQ99613 913 aaKnown RBP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 C7orf25Q9BPX7 421 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MLXIPQ9HAP2 919 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 IVLP07476 585 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MRPL12P52815 198 aaKnown RBP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 PPARDQ03181 441 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 GOLGA5Q8TBA6 731 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 PLEKHA4Q9H4M7 779 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MED4Q9NPJ6 270 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 PCDHA13Q9Y5I0 950 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MYH8P13535 1937 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MYMKA6NI61 221 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 RNF40O75150 1001 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 SLC16A2P36021 539 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 NT5C2P49902 561 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 RNASE9P60153 205 aaKnown RBP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 HERC4Q5GLZ8 1057 aaPredicted RBP9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 UNC13DQ70J99 1090 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 MYOCDQ8IZQ8 938 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 ANKS1AQ92625 1134 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 DDX12PQ92771 950 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 PCDHA12Q9UN75 941 aa9.57□□□□□ -0.88
TMPRSS4-219ENST00000616579 CNTNAP4Q9C0A0 1308 aa9.56□□□□□ -0.88
TMPRSS4-219ENST00000616579 TIAM2Q8IVF5 1701 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms