RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SEC63Q9UGP8 760 aaKnown RBP25.66■■□□□ 1.7
CBWD3-212ENST00000616550 CTAGE5O15320 804 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 FGD1P98174 961 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 BEX3Q00994 111 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 GHRHRQ02643 423 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 STXBP2Q15833 593 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 MICU3Q86XE3 530 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 RAB11FIP4Q86YS3 637 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 SRBD1Q8N5C6 995 aaKnown RBP25.65■■□□□ 1.7
CBWD3-212ENST00000616550 SCFD2Q8WU76 684 aa25.65■■□□□ 1.7
CBWD3-212ENST00000616550 ELP1O95163 1332 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 GCOM1H8Y6P7 765 aaPredicted RBP25.64■■□□□ 1.7
CBWD3-212ENST00000616550 PLEKHA8P1O95397 391 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 POLR2MP0CAP2 368 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 TMEM63BQ5T3F8 832 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 JAKMIP1Q96N16 626 aaKnown RBP25.64■■□□□ 1.7
CBWD3-212ENST00000616550 GDF15Q99988 308 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 PRO3102Q9H379 93 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 SNX14Q9Y5W7 946 aa25.64■■□□□ 1.7
CBWD3-212ENST00000616550 NKRFO15226 690 aaKnown RBP eCLIP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 EPB41L2O43491 1005 aaKnown RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 EIF2AK2P19525 551 aaKnown RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 PTGS1P23219 599 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 HOXA13P31271 388 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 MAGEA10P43363 369 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 TLE2Q04725 743 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 TTLL4Q14679 1199 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 PPP2R5BQ15173 497 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 APOA5Q6Q788 366 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 CMTR1Q8N1G2 835 aaKnown RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 LBHD1Q9BQE6 289 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 PRDM5Q9NQX1 630 aaPredicted RBP25.63■■□□□ 1.69
CBWD3-212ENST00000616550 PXMP2Q9NR77 195 aa25.63■■□□□ 1.69
CBWD3-212ENST00000616550 BMP8BP34820 402 aa25.62■■□□□ 1.69
CBWD3-212ENST00000616550 BLOC1S2Q6QNY1 142 aa25.62■■□□□ 1.69
CBWD3-212ENST00000616550 RBM28Q9NW13 759 aaKnown RBP25.62■■□□□ 1.69
CBWD3-212ENST00000616550 DNAH12Q6ZR08 3092 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 ZBTB43O43298 467 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 PQBP1O60828 265 aaKnown RBP25.61■■□□□ 1.69
CBWD3-212ENST00000616550 CABYRO75952 493 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 NR3C2P08235 984 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 TXNP10599 105 aaKnown RBP25.61■■□□□ 1.69
CBWD3-212ENST00000616550 PSMA5P28066 241 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 SEPT14Q6ZU15 432 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 TMTC3Q6ZXV5 915 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 CCDC82Q8N4S0 544 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 OR6J1Q8NGC5 347 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 BRPF3Q9ULD4 1205 aa25.61■■□□□ 1.69
CBWD3-212ENST00000616550 A0A0U1RQG5 324 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-212ENST00000616550 DCDC2CA8MYV0 355 aa25.6■■□□□ 1.69
CBWD3-212ENST00000616550 EIF3JO75822 258 aaKnown RBP25.6■■□□□ 1.69
CBWD3-212ENST00000616550 MDM2Q00987 491 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-212ENST00000616550 CXCL17Q6UXB2 119 aa25.6■■□□□ 1.69
CBWD3-212ENST00000616550 FCHSD1Q86WN1 690 aa25.6■■□□□ 1.69
CBWD3-212ENST00000616550 NAP1L2Q9ULW6 460 aaPredicted RBP25.6■■□□□ 1.69
CBWD3-212ENST00000616550 MROH7Q68CQ1 1323 aa25.6■■□□□ 1.69
CBWD3-212ENST00000616550 KIAA1217Q5T5P2 1943 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 KLF18A0A0U1RQI7 1052 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 A0A1W2PPC1 479 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 CLTBP09497 229 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 CPA1P15085 419 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 CPT1AP50416 773 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 RTN1Q16799 776 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 BRDTQ58F21 947 aaPredicted RBP25.59■■□□□ 1.69
CBWD3-212ENST00000616550 ANKRD33Q7Z3H0 272 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 TOX2Q96NM4 488 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 PDCD2LQ9BRP1 358 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 UBE2OQ9C0C9 1292 aaKnown RBP25.59■■□□□ 1.69
CBWD3-212ENST00000616550 PDLIM7Q9NR12 457 aa25.59■■□□□ 1.69
CBWD3-212ENST00000616550 ARVCFO00192 962 aa25.58■■□□□ 1.69
CBWD3-212ENST00000616550 MYCLP12524 364 aaPredicted RBP25.58■■□□□ 1.69
CBWD3-212ENST00000616550 Q6ZUG5 572 aa25.58■■□□□ 1.69
CBWD3-212ENST00000616550 CUL5Q93034 780 aa25.58■■□□□ 1.69
CBWD3-212ENST00000616550 USP26Q9BXU7 913 aa25.58■■□□□ 1.69
CBWD3-212ENST00000616550 PCDH10Q9P2E7 1040 aa25.58■■□□□ 1.69
CBWD3-212ENST00000616550 TRIOBPQ9H2D6 2365 aa25.58■■□□□ 1.68
CBWD3-212ENST00000616550 GOLGA8AA7E2F4 631 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 GOLGA8BA8MQT2 603 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 CDK7P50613 346 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 PGM5Q15124 567 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 SH3RF1Q7Z6J0 888 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 SMARCC2Q8TAQ2 1214 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 COPS5Q92905 334 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 TMEM39AQ9NV64 488 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 POLR3EQ9NVU0 708 aa25.57■■□□□ 1.68
CBWD3-212ENST00000616550 hCG_1642624A0A1W2PR95 340 aa25.56■■□□□ 1.68
CBWD3-212ENST00000616550 ARIH2O95376 493 aa25.56■■□□□ 1.68
CBWD3-212ENST00000616550 CASTP20810 708 aaKnown RBP25.56■■□□□ 1.68
CBWD3-212ENST00000616550 RPS6KB1P23443 525 aa25.56■■□□□ 1.68
CBWD3-212ENST00000616550 RCAN1P53805 252 aa25.56■■□□□ 1.68
CBWD3-212ENST00000616550 CCDC62Q6P9F0 684 aa25.56■■□□□ 1.68
CBWD3-212ENST00000616550 TRIM43BA6NCK2 446 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 MYL3P08590 195 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 CCND2P30279 289 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 APOBRQ0VD83 1088 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 FAAP100Q0VG06 881 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 ITGA7Q13683 1181 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 LY6KQ17RY6 165 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 VSIG10LQ86VR7 867 aa25.55■■□□□ 1.68
CBWD3-212ENST00000616550 BRF1Q92994 677 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms