RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 TMEM47Q9BQJ4 181 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 BPIFA3Q9BQP9 254 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 OSBPL5Q9H0X9 879 aaPredicted RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 USP40Q9NVE5 1235 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 ANO10Q9NW15 660 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 MTMR4Q9NYA4 1195 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 USP25Q9UHP3 1055 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 MAD2L2Q9UI95 211 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 SERPINB13Q9UIV8 391 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 SYNPO2Q9UMS6 1093 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 NOL7Q9UMY1 257 aaKnown RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 DOLKQ9UPQ8 538 aa9□□□□□ -0.97
MALAT1-208ENST00000616527 SRPRBQ9Y5M8 271 aaKnown RBP9□□□□□ -0.97
MALAT1-208ENST00000616527 BAZ2AQ9UIF9 1905 aaKnown RBP8.99□□□□□ -0.97
MALAT1-208ENST00000616527 MYH2Q9UKX2 1941 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ESYT2A0FGR8 921 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 TRIM75PA6NK02 468 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ECE2O60344 883 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 NMT2O60551 498 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ENTPD3O75355 529 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ZNF202O95125 648 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 HLA-DOAP06340 250 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 RHOQP17081 205 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 NDUFA8P51970 172 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 TGFB2P61812 414 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ORC2Q13416 577 aaPredicted RBP8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ASPRV1Q53RT3 343 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC93Q567U6 631 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 KANK3Q6NY19 840 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 FOXP4Q8IVH2 680 aaPredicted RBP8.99□□□□□ -0.97
MALAT1-208ENST00000616527 TEX2Q8IWB9 1127 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 STK11IPQ8N1F8 1099 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC12Q8WUD4 166 aaPredicted RBP8.99□□□□□ -0.97
MALAT1-208ENST00000616527 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 PYM1Q9BRP8 204 aaKnown RBP8.99□□□□□ -0.97
MALAT1-208ENST00000616527 KCNJ14Q9UNX9 436 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 MYH15Q9Y2K3 1946 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 ATRNL1Q5VV63 1379 aa8.99□□□□□ -0.97
MALAT1-208ENST00000616527 CDC14CA4D256 554 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 UBE2Q2LH0YL09 131 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 M0R2N6 131 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 TPM3P06753 285 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 PARP1P09874 1014 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 PFKFB1P16118 471 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 SYKP43405 635 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 KRT76Q01546 638 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 CAMK4Q16566 473 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 CT47A1Q5JQC4 288 aaPredicted RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 FKBP1CQ5VVH2 108 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 ARL6IP4Q66PJ3 421 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 SHC4Q6S5L8 630 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 OLFM4Q6UX06 510 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 SLC44A5Q8NCS7 719 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 RNF214Q8ND24 703 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 MKL1Q969V6 931 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 SDF4Q9BRK5 362 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 NAT10Q9H0A0 1025 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 RIOX1Q9H6W3 641 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 DDX4Q9NQI0 724 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 BARHL2Q9NY43 387 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 FAM13BQ9NYF5 915 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 VPS54Q9P1Q0 977 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 PI4KBQ9UBF8 816 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC39Q9UFE4 941 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 SAP30BPQ9UHR5 308 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 HOOK1Q9UJC3 728 aaKnown RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 TUBE1Q9UJT0 475 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 FBXO2Q9UK22 296 aaPredicted RBP8.98□□□□□ -0.97
MALAT1-208ENST00000616527 PCDHA4Q9UN74 947 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 NAV1Q8NEY1 1877 aa8.98□□□□□ -0.97
MALAT1-208ENST00000616527 A0A1B0GVL5 298 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 KLRF2D3W0D1 207 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 MYO1BO43795 1136 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 TTLL1O95922 423 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CHRNA5P30532 468 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 SHMT1P34896 483 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 ZNF165P49910 485 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 NLRP5P59047 1200 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 ATP2C1P98194 919 aaPredicted RBP8.97□□□□□ -0.97
MALAT1-208ENST00000616527 POU4F2Q12837 409 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 IQCB1Q15051 598 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 GPATCH4Q5T3I0 446 aaKnown RBP8.97□□□□□ -0.97
MALAT1-208ENST00000616527 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.97□□□□□ -0.97
MALAT1-208ENST00000616527 ZSCAN30Q86W11 494 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CKAP2LQ8IYA6 745 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 BLIDQ8IZY5 108 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CMTR1Q8N1G2 835 aaKnown RBP8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CEP95Q96GE4 821 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 GMLQ99445 158 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 DBNDD1Q9H9R9 158 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 CABP5Q9NP86 173 aa8.97□□□□□ -0.97
MALAT1-208ENST00000616527 RAB6BQ9NRW1 208 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms