RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 SPAG5Q96R06 1193 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 TRAF5O00463 557 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 CEP104O60308 925 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 MMP10P09238 476 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 SCG2P13521 617 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 TCP1P17987 556 aaKnown RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 TNNI2P48788 182 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 NAA25Q14CX7 972 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 KRT27Q7Z3Y8 459 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 PNMA1Q8ND90 353 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 HPS3Q969F9 1004 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 NBPF3Q9H094 633 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 BMP2KQ9NSY1 1161 aaPredicted RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 LIMA1Q9UHB6 759 aaKnown RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 FOXP2O15409 715 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 SYF2O95926 243 aaKnown RBP15.86■□□□□ 0.13
EPHB4-210ENST00000616502 WDR93Q6P2C0 686 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 STAG2Q8N3U4 1231 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 ARL8AQ96BM9 186 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 MS4A14Q96JA4 679 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 SELENOSQ9BQE4 189 aa15.86■□□□□ 0.13
EPHB4-210ENST00000616502 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 PLEKP08567 350 aaPredicted RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 HNRNPH1P31943 449 aaKnown RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 ZBED6P86452 979 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 CABP7Q86V35 215 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 SPICE1Q8N0Z3 855 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 SPATA4Q8NEY3 305 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 DYDC1Q8WWB3 177 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 STIM2Q9P246 746 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 EZRP15311 586 aaKnown RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 SEC24CP53992 1094 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 CDKAL1Q5VV42 579 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 VIPAS39Q9H9C1 493 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 LRRC4BQ9NT99 713 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 PCDHA13Q9Y5I0 950 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 RPSAP08865 295 aaKnown RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 CCDC172P0C7W6 258 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 EEF1GP26641 437 aaKnown RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 TECP42680 631 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 GPSM2P81274 684 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 BLIDQ8IZY5 108 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
EPHB4-210ENST00000616502 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
EPHB4-210ENST00000616502 KIF11P52732 1056 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 PNMA8AQ86V59 439 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 ARFGAP2Q8N6H7 521 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 DCP1AQ9NPI6 582 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 BAIAP2L1Q9UHR4 511 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 PACSIN2Q9UNF0 486 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 GCOM1H8Y6P7 765 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 MYZAPP0CAP1 466 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 NR1D1P20393 614 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 CHRNA5P30532 468 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 PLA2G12BQ9BX93 195 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 UBXN6Q9BZV1 441 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 EIF3HO15372 352 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■□□□ 11.9
EPHB4-210ENST00000616502 LDHCP07864 332 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 ARID4AP29374 1257 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 TNNC1P63316 161 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 APBA1Q02410 837 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 VGLL2Q8N8G2 317 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 BANK1Q8NDB2 785 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 CEP89Q96ST8 783 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 TRPC5Q9UL62 973 aaPredicted RBP15.84■□□□□ 0.13
EPHB4-210ENST00000616502 SLIT3O75094 1523 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 XDHP47989 1333 aa15.84■□□□□ 0.13
EPHB4-210ENST00000616502 CLRN2A0PK11 232 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 KCNK3O14649 394 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 LRRC41Q15345 812 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 KCTD19Q17RG1 926 aaPredicted RBP15.83■□□□□ 0.13
EPHB4-210ENST00000616502 NELFCDQ8IXH7 590 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 EYA3Q99504 573 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 PKD2L1Q9P0L9 805 aa15.83■□□□□ 0.13
EPHB4-210ENST00000616502 PDE2AO00408 941 aaPredicted RBP15.83■□□□□ 0.12
EPHB4-210ENST00000616502 PSMD14O00487 310 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 CTNNA1P35221 906 aaKnown RBP15.83■□□□□ 0.12
EPHB4-210ENST00000616502 HERVK_113P62684 666 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 PRR5LQ6MZQ0 368 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 TBC1D31Q96DN5 1066 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 OSBPL9Q96SU4 736 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.12
EPHB4-210ENST00000616502 USH1GQ495M9 461 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 ADAT2Q7Z6V5 191 aaKnown RBP15.83■□□□□ 0.12
EPHB4-210ENST00000616502 FBXL16Q8N461 479 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 P2RX5Q93086 422 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 USP40Q9NVE5 1235 aa15.83■□□□□ 0.12
EPHB4-210ENST00000616502 DCCP43146 1447 aa15.82■□□□□ 0.12
EPHB4-210ENST00000616502 CLNS1AP54105 237 aaKnown RBP15.82■□□□□ 0.12
EPHB4-210ENST00000616502 KRT71Q3SY84 523 aa15.82■□□□□ 0.12
EPHB4-210ENST00000616502 NSUN4Q96CB9 384 aaKnown RBP15.82■□□□□ 0.12
EPHB4-210ENST00000616502 RBM17Q96I25 401 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms