RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 FKBP3Q00688 224 aaKnown RBP14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 IFT81Q8WYA0 676 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 GJA10Q969M2 543 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 IQCDQ96DY2 449 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 PANX2Q96RD6 677 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 FAM170AA1A519 330 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 MFAP3LO75121 409 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 STAT2P52630 851 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 LRCH2Q5VUJ6 765 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 MIER3Q7Z3K6 550 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 TSPYL1Q9H0U9 437 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 RABGAP1Q9Y3P9 1069 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 COL4A3BPQ9Y5P4 624 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 TMEM110-MUSTN1A8MSY1 372 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 CYP2J2P51589 502 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 C16orf86Q6ZW13 317 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 HDXQ7Z353 690 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 TAX1BP1Q86VP1 789 aa14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 GPR161Q8N6U8 529 aaKnown RBP14.59□□□□□ -0.07
PPP4R3B-206ENST00000616407 CHRNA5P30532 468 aa14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 CCDC93Q567U6 631 aa14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 TTLL6Q8N841 843 aa14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 HPSEQ9Y251 543 aa14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 BAZ2BQ9UIF8 2168 aaKnown RBP14.58□□□□□ -0.07
PPP4R3B-206ENST00000616407 F5H6K3 240 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 ACTN4O43707 911 aaKnown RBP14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 PLA2G4BP0C869 781 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 SMTNP53814 917 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 CCZ1BP86790 482 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 CCZ1P86791 482 aaPredicted RBP14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 KLRC3Q07444 240 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 NAA30Q147X3 362 aaPredicted RBP14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 TOGARAM2Q6ZUX3 1019 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 FAM178BQ8IXR5 827 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 DDX12PQ92771 950 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 FLOT1O75955 427 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 QRICH1Q2TAL8 776 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 NUCKS1Q9H1E3 243 aaKnown RBP14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 RIC8AQ9NPQ8 531 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 POLLQ9UGP5 575 aa14.58□□□□□ -0.08
PPP4R3B-206ENST00000616407 TESPA1A2RU30 521 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 ENC1O14682 589 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 TNFAIP3P21580 790 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 NR2F2P24468 414 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 MB21D1Q8N884 522 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 CERKQ8TCT0 537 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 PHLPP2Q6ZVD8 1323 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 FAM208AQ9UK61 1670 aaKnown RBP14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 HSF2BPO75031 334 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 MAN2A1Q16706 1144 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 VPS18Q9P253 973 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 SUGT1Q9Y2Z0 365 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 VAV2P52735 878 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 CDC23Q9UJX2 597 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 GOLGA6L10A0A0M3HER8 536 aa14.57□□□□□ -0.08
PPP4R3B-206ENST00000616407 STXBP3O00186 592 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 DPYDQ12882 1025 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 PKN1Q16512 942 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 CCDC113Q9H0I3 377 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 EMILIN3Q9NT22 766 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 ARHGAP44Q17R89 818 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 WHAMMP3Q1A5X7 153 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 RETREG2Q8NC44 543 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 RGS22Q8NE09 1264 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 UNC13DQ70J99 1090 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 DCAF4Q8WV16 495 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 TEKT3Q9BXF9 490 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 NDST4Q9H3R1 872 aa14.56□□□□□ -0.08
PPP4R3B-206ENST00000616407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■■■■■ 46.6
PPP4R3B-206ENST00000616407 BUB1O43683 1085 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 NDUFA10O95299 355 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 PDHBP11177 359 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 E4F1Q66K89 784 aaPredicted RBP14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 TRIM58Q8NG06 486 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 CCSER1Q9C0I3 900 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 MAD2L2Q9UI95 211 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 RGPD1P0DJD0 1748 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 E9PMD0 336 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 HARSP12081 509 aaKnown RBP14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 ZBED6P86452 979 aa14.55□□□□□ -0.08
PPP4R3B-206ENST00000616407 ODR4Q5SWX8 454 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms