RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NOD1Q9Y239 953 aa20.78■□□□□ 0.92
TRAPPC3-209ENST00000616395 LINC01553A4QN01 128 aa20.77■□□□□ 0.91
TRAPPC3-209ENST00000616395 GSG1L2A8MUP6 293 aa20.77■□□□□ 0.91
TRAPPC3-209ENST00000616395 ATP5JP18859 108 aa20.77■□□□□ 0.91
TRAPPC3-209ENST00000616395 LRRFIP1Q32MZ4 808 aaKnown RBP20.77■□□□□ 0.91
TRAPPC3-209ENST00000616395 RAD9AQ99638 391 aa20.77■□□□□ 0.91
TRAPPC3-209ENST00000616395 TET1Q8NFU7 2136 aa20.76■□□□□ 0.91
TRAPPC3-209ENST00000616395 GJB5O95377 273 aa20.76■□□□□ 0.91
TRAPPC3-209ENST00000616395 PTPN11Q06124 597 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-209ENST00000616395 PUS10Q3MIT2 529 aaKnown RBP20.76■□□□□ 0.91
TRAPPC3-209ENST00000616395 RBM47A0AV96 593 aaKnown RBP20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 H3BQ06 376 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 PDE4AP27815 886 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 ALDH5A1P51649 535 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 CHMP4BP1P59074 171 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 TCTN1Q2MV58 587 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 GIMAP6Q6P9H5 292 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 HFE2Q6ZVN8 426 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 NEK9Q8TD19 979 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 PHOX2BQ99453 314 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 LCTP09848 1927 aa20.75■□□□□ 0.91
TRAPPC3-209ENST00000616395 SCN10AQ9Y5Y9 1956 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 RBAK-RBAKDNI3L0D1 243 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 KPNA6O60684 536 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 MCCP23508 829 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 SLC1A4P43007 532 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 PTGISQ16647 500 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 BRDTQ58F21 947 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 CNKSR3Q6P9H4 555 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 AFAP1L1Q8TED9 768 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 LNPKQ9C0E8 428 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 CCPG1Q9ULG6 757 aa20.74■□□□□ 0.91
TRAPPC3-209ENST00000616395 BAATQ14032 418 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 FAM117BQ6P1L5 589 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 KCTD1Q719H9 257 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 LRRC8DQ7L1W4 858 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 CAGE1Q8TC20 777 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 CTAGE1Q96RT6 745 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 C17orf80Q9BSJ5 609 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 ZNF287Q9HBT7 754 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 ADD3Q9UEY8 706 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 PRR12Q9ULL5 1215 aa20.73■□□□□ 0.91
TRAPPC3-209ENST00000616395 RAD50Q92878 1312 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 A6NJR5 290 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 ZP2Q05996 745 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 FBXO22Q8NEZ5 403 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 NEDD1Q8NHV4 660 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 COPS5Q92905 334 aa20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 EPB41L4AQ9HCS5 686 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC3-209ENST00000616395 PLIN4Q96Q06 1357 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 ABHD14A-ACY1A0A1B0GW23 586 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 PLA2G6O60733 806 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 NBNO60934 754 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 SELPP16109 830 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 PPP2R5BQ15173 497 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 MRPL38Q96DV4 380 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 BACH2Q9BYV9 841 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 SIP14410 1827 aa20.71■□□□□ 0.91
TRAPPC3-209ENST00000616395 CXCL10P02778 98 aa20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 TDO2P48775 406 aa20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 GDF6Q6KF10 455 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 RASGRP2Q7LDG7 609 aa20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 MFSD14AQ96MC6 490 aa20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 ECHDC1Q9NTX5 307 aa20.7■□□□□ 0.9
TRAPPC3-209ENST00000616395 LOC102724159A0A0B4J2E5 919 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 C19orf67A6NJJ6 358 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 NFIBO00712 420 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 NKRFO15226 690 aaKnown RBP eCLIP20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 ICAM1P05362 532 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 TFAP4Q01664 338 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 PWP2Q15269 919 aaKnown RBP20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 RCSD1Q6JBY9 416 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 EP400NLQ6ZTU2 488 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 OSBP2Q969R2 916 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 PRKAG3Q9UGI9 489 aa20.69■□□□□ 0.9
TRAPPC3-209ENST00000616395 CKBP12277 381 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 SLC30A10Q6XR72 485 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 ADHFE1Q8IWW8 467 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 SCFD2Q8WU76 684 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 CTNNA3Q9UI47 895 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 FAM50BQ9Y247 325 aa20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 RBM19Q9Y4C8 960 aaKnown RBP20.68■□□□□ 0.9
TRAPPC3-209ENST00000616395 PTPDC1A2A3K4 754 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 PARNO95453 639 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 APPP05067 770 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 TXNP10599 105 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 IRS1P35568 1242 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 PDE4DQ08499 809 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 IKBKEQ14164 716 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 PTPROQ16827 1216 aa20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 PABPC5Q96DU9 382 aaKnown RBP20.67■□□□□ 0.9
TRAPPC3-209ENST00000616395 INSL6Q9Y581 213 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms