RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 KIAA0895Q8NCT3 520 aa15.5■□□□□ 0.07
CACNA1C-231ENST00000616390 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
CACNA1C-231ENST00000616390 FAM163AQ96GL9 167 aaPredicted RBP15.5■□□□□ 0.07
CACNA1C-231ENST00000616390 TBC1D7Q9P0N9 293 aa15.5■□□□□ 0.07
CACNA1C-231ENST00000616390 CDC23Q9UJX2 597 aa15.5■□□□□ 0.07
CACNA1C-231ENST00000616390 MYMKA6NI61 221 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 CCNE1P24864 410 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 SNAP25P60880 206 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 AMPD3Q01432 767 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 TRIM14Q14142 442 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 NCAPH2Q6IBW4 605 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 RSRC2Q7L4I2 434 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 KIAA0825Q8IV33 1275 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 GLIS3Q8NEA6 775 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 JMJD4Q9H9V9 463 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 PPP1R11O60927 126 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 TTLL1O95922 423 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 ARHGAP25P42331 645 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 PLA2G4AP47712 749 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 TMEM266Q2M3C6 531 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 ZNF507Q8TCN5 953 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 DHTKD1Q96HY7 919 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 NAPGQ99747 312 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 REXO2Q9Y3B8 237 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 DNM2P50570 870 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 CYP27A1Q02318 531 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 CCDC122Q5T0U0 273 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 CC2D1AQ6P1N0 951 aaPredicted RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 WDR59Q6PJI9 974 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 KCNK18Q7Z418 384 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 SRGAP1Q7Z6B7 1085 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 KIAA1328Q86T90 577 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 LARP4BQ92615 738 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 C7orf25Q9BPX7 421 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 ZCCHC17Q9NP64 241 aaKnown RBP15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 BLOC1S4Q9NUP1 217 aa15.49■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 SASH3O75995 380 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 CDC42EP5Q6NZY7 148 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 PNMA5Q96PV4 448 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 CRAMP1Q96RY5 1269 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 QTRT2Q9H974 415 aaKnown RBP15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 FAM207AQ9NSI2 230 aaPredicted RBP15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 BICDL2A1A5D9 508 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 ERICH4A6NGS2 130 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 EDIL3O43854 480 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 SRGAP2O75044 1071 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 ZRANB2O95218 330 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 MYL1P05976 194 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 ASPRV1Q53RT3 343 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 SP8Q8IXZ3 490 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 CAPZA3Q96KX2 299 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 CUEDC2Q9H467 287 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 ARFGAP3Q9NP61 516 aa15.48■□□□□ 0.07
CACNA1C-231ENST00000616390 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 GABPAQ06546 454 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 ECM1Q16610 540 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 RABGGTAQ92696 567 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 MTMR9Q96QG7 549 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 COA1Q9GZY4 146 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 CAPN11Q9UMQ6 739 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 DUSP10Q9Y6W6 482 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 THSD7AQ9UPZ6 1657 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 SHMT1P34896 483 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 NT5C2P49902 561 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 ZNF543Q08ER8 600 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 TERF2Q15554 542 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 KRT79Q5XKE5 535 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 TANGO6Q9C0B7 1094 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 MMRN2Q9H8L6 949 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
CACNA1C-231ENST00000616390 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 PNMA6FA0A0J9YX94 578 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 RASSF10A6NK89 507 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 PLEKP08567 350 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 DDX12PQ92771 950 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 ZHX3Q9H4I2 956 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 PSTPIP2Q9H939 334 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 TBC1D8O95759 1140 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 SRGNP10124 158 aa15.46■□□□□ 0.07
CACNA1C-231ENST00000616390 TAL1P17542 331 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms