RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TRPC5Q9UL62 973 aaPredicted RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 COL4A3BPQ9Y5P4 624 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 MORC2Q9Y6X9 1032 aaPredicted RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 COL5A2P05997 1499 aaPredicted RBP6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 GPR75-ASB3A0A0A6YYF3 556 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 TLDC2A0PJX2 215 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 RHOBTB3O94955 611 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 TRIM37O94972 964 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 FCER1AP12319 257 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 STAT1P42224 750 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 RPS6KA1Q15418 735 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 UNC13DQ70J99 1090 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 LMBR1Q8WVP7 490 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 INTS13Q9NVM9 706 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 JRKLQ9Y4A0 524 aa6.23□□□□□ -1.41
SYNCRIP-204ENST00000616122 GOLGA6L10A0A0M3HER8 536 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PALM3A6NDB9 673 aaPredicted RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 LRRC63Q05C16 580 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 DMTNQ08495 405 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 TPH2Q8IWU9 490 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 EHMT1Q9H9B1 1298 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 METTL14Q9HCE5 456 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 HYOU1Q9Y4L1 999 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM205AQ6ZU69 1335 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 ARHGEF35A5YM69 484 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PPP1R3GB7ZBB8 358 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 OPA1O60313 960 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 IVLP07476 585 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 FUT2Q10981 343 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 CASP8Q14790 479 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 QRICH1Q2TAL8 776 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PLEKHA4Q9H4M7 779 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 THAP9Q9H5L6 903 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 ABCB6Q9NP58 842 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PLAGL2Q9UPG8 496 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 F5H6K3 240 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 H0YIN7 160 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 GAS7O60861 476 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 KLRC3Q07444 240 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 TRIM65Q6PJ69 517 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM178BQ8IXR5 827 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 CHURC1Q8WUH1 139 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 TCHPQ9BT92 498 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 SELENOOQ9BVL4 669 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 ANO3Q9BYT9 981 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 DHX36Q9H2U1 1008 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 SSR1P43307 286 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 KIF11P52732 1056 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PPFIA1Q13136 1202 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 RBM26Q5T8P6 1007 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 NOA1Q8NC60 698 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 NKX2-3Q8TAU0 364 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 TBC1D16Q8TBP0 767 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 JDP2Q8WYK2 163 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 AGPAT5Q9NUQ2 364 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 GSTTP1A0A1W2PQM5 241 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 ESYT2A0FGR8 921 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 E9PMD0 336 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 NDUFAB1O14561 156 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PPIP5K2O43314 1243 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 GDF11O95390 407 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 H2AFXP16104 143 aaPredicted RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 CETN2P41208 172 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 SEMA3FQ13275 785 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 SEPT2Q15019 361 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PTPROQ16827 1216 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM83BQ5T0W9 1011 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 ALKBH5Q6P6C2 394 aaKnown RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 RASGRP2Q7LDG7 609 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 PTF1AQ7RTS3 328 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 KLHL7Q8IXQ5 586 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 CTNNBL1Q8WYA6 563 aaPredicted RBP6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 CSRNP1Q96S65 589 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 MED4Q9NPJ6 270 aa6.22□□□□□ -1.41
SYNCRIP-204ENST00000616122 A0A087X0B3 334 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 PNMA6FA0A0J9YX94 578 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ANO9A1A5B4 782 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 CYTH3O43739 400 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 EPB41P11171 864 aaKnown RBP6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 RASSF7Q02833 373 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ABCB5Q2M3G0 1257 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 MSL1Q68DK7 614 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 MYCT1Q8N699 235 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 FAM76AQ8TAV0 307 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 TMEM260Q9NX78 707 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZBTB21Q9ULJ3 1066 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ZBTB5O15062 677 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 BUB1O43683 1085 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 GCNT3O95395 438 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 CXCR5P32302 372 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 VSNL1P62760 191 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 SP4Q02446 784 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 EXOC3L4Q17RC7 722 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ODR4Q5SWX8 454 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms