RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 USP38Q8NB14 1042 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 TBC1D5Q92609 795 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 VWCEQ96DN2 955 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 GPHNQ9NQX3 736 aaPredicted RBP24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 ZSWIM5Q9P217 1185 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 CHD7Q9P2D1 2997 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 RAD50Q92878 1312 aa24.31■■□□□ 1.48
TRAPPC3-208ENST00000616074 KIAA1217Q5T5P2 1943 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 ARIH2O95376 493 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 RAB30Q15771 203 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 IMMTQ16891 758 aaKnown RBP24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 BRDTQ58F21 947 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 PPP1R13LQ8WUF5 828 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 MSRAQ9UJ68 235 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 ABCB11O95342 1321 aa24.3■■□□□ 1.48
TRAPPC3-208ENST00000616074 A6NJR5 290 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 B4DLN1 442 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 SUPT20HL2P0C7V6 817 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 TXNP10599 105 aaKnown RBP24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 MRPL12P52815 198 aaKnown RBP24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 NBPF20Q3BBV1 942 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 ASPRV1Q53RT3 343 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 RPUSD2Q8IZ73 545 aaKnown RBP24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 IL25Q9H293 177 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 PRDM12Q9H4Q4 367 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 COL20A1Q9P218 1284 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 TANC1Q9C0D5 1861 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 MYO9BQ13459 2157 aa24.29■■□□□ 1.48
TRAPPC3-208ENST00000616074 TTLL4Q14679 1199 aa24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 QRICH1Q2TAL8 776 aa24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 FAM47CQ5HY64 1035 aa24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 SYTL5Q8TDW5 730 aaPredicted RBP24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 TAAR1Q96RJ0 339 aa24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 GAS2L1Q99501 681 aaPredicted RBP24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 NKX2-4Q9H2Z4 354 aa24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 YBX2Q9Y2T7 364 aaKnown RBP24.28■■□□□ 1.48
TRAPPC3-208ENST00000616074 PARP1P09874 1014 aaKnown RBP24.27■■□□□ 1.48
TRAPPC3-208ENST00000616074 KRT23Q9C075 422 aa24.27■■□□□ 1.48
TRAPPC3-208ENST00000616074 MAF1Q9H063 256 aa24.27■■□□□ 1.48
TRAPPC3-208ENST00000616074 CTNNA3Q9UI47 895 aa24.27■■□□□ 1.48
TRAPPC3-208ENST00000616074 DHX16O60231 1041 aaKnown RBP24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 KPNA6O60684 536 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 NFRKBQ6P4R8 1299 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 CCDC62Q6P9F0 684 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 JMJD4Q9H9V9 463 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 VAT1LQ9HCJ6 419 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 SLC4A7Q9Y6M7 1214 aa24.26■■□□□ 1.47
TRAPPC3-208ENST00000616074 ZBBXA8MT70 800 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 RABGGTBP53611 331 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 SEPT14Q6ZU15 432 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 DEFB128Q7Z7B8 93 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 FBXO11Q86XK2 927 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 MCF2L2Q86YR7 1114 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 NSUN6Q8TEA1 469 aaKnown RBP24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 UBAC1Q9BSL1 405 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 CNNM2Q9H8M5 875 aa24.25■■□□□ 1.47
TRAPPC3-208ENST00000616074 PFKMP08237 780 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 ADGRE1Q14246 886 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 LY6KQ17RY6 165 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 IFIT1BQ5T764 474 aaKnown RBP24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 STAG2Q8N3U4 1231 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 RMDN3Q96TC7 470 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 SLC28A3Q9HAS3 691 aa24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 MRPL11Q9Y3B7 192 aaKnown RBP24.24■■□□□ 1.47
TRAPPC3-208ENST00000616074 GSPT1P15170 499 aaKnown RBP24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 PDE4AP27815 886 aa24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 PTPN11Q06124 597 aaPredicted RBP24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 AFG1LQ8WV93 481 aa24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 PPM1EQ8WY54 764 aa24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 PRDM6Q9NQX0 595 aa24.23■■□□□ 1.47
TRAPPC3-208ENST00000616074 GH1P01241 217 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 MMP3P08254 477 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 MYOGP15173 224 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 CHMP4BP1P59074 171 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 ARHGAP1Q07960 439 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 SEC23AQ15436 765 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 STXBP2Q15833 593 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 CYB5R4Q7L1T6 521 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 IWS1Q96ST2 819 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 MUC3AQ02505 3323 aa24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 TRIP12Q14669 1992 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC3-208ENST00000616074 REV3LO60673 3130 aa24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 PITPNM1O00562 1244 aa24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 ATP2A2P16615 1042 aaKnown RBP24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 EIF2AK2P19525 551 aaKnown RBP24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 TTC22Q5TAA0 569 aa24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 ARHGEF16Q5VV41 709 aa24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 PCDHA11Q9Y5I1 949 aa24.21■■□□□ 1.47
TRAPPC3-208ENST00000616074 MYH7BA7E2Y1 1941 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 OPLAHO14841 1288 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 CFBP00751 764 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 IQCF3P0C7M6 154 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 RFC2P35250 354 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 PPP2R2DQ66LE6 453 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 CHST3Q7LGC8 479 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 AMNQ9BXJ7 453 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 PXMP2Q9NR77 195 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 MAD2L2Q9UI95 211 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
TRAPPC3-208ENST00000616074 TET1Q8NFU7 2136 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms