RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 ARHGEF10LQ9HCE6 1279 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 SLC12A2P55011 1212 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 CTSWP56202 376 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 FKBP3Q00688 224 aaKnown RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 LMNB2Q03252 620 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 HADHQ16836 314 aaKnown RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 C6orf118Q5T5N4 469 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 GSPT2Q8IYD1 628 aaKnown RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 NLRP7Q8WX94 980 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 TUBB6Q9BUF5 446 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 AP1M1Q9BXS5 423 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 PCDHB6Q9Y5E3 794 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 ERVK-7P63135 1459 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 SPECC1L-ADORA2AF8WAN1 911 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 GAS7O60861 476 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 SERPING1P05155 500 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 FAM178BQ8IXR5 827 aa20.52■□□□□ 0.88
SPAST-203ENST00000615843 TAB3Q8N5C8 712 aaPredicted RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 ABTB1Q969K4 478 aaPredicted RBP20.52■□□□□ 0.88
SPAST-203ENST00000615843 PRR16Q569H4 304 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 SLFN12Q8IYM2 578 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 ABHD10Q9NUJ1 306 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 TADA3O75528 432 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 INHBAP08476 426 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 IFNAR1P17181 557 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 KAZNQ674X7 775 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 NUGGCQ68CJ6 796 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 PSTPIP2Q9H939 334 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 ZSCAN20P17040 1043 aaPredicted RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 YWHAGP61981 247 aaKnown RBP eCLIP20.51■□□□□ 0.87
SPAST-203ENST00000615843 SEPT2Q15019 361 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 RNF34Q969K3 372 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 C1orf112Q9NSG2 853 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 TBK1Q9UHD2 729 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 ANO9A1A5B4 782 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 SH2B2O14492 632 aaPredicted RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 AFPP02771 609 aaKnown RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 MMEP08473 750 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 GOLGA8HP0CJ92 632 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 ADCY2Q08462 1091 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 TOB2Q14106 344 aaPredicted RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 LRRC41Q15345 812 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 SGO2Q562F6 1265 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 C10orf76Q5T2E6 689 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 ZNF449Q6P9G9 518 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 FMR1NBQ8N0W7 255 aaPredicted RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 AIFM3Q96NN9 605 aa20.51■□□□□ 0.87
SPAST-203ENST00000615843 RTCBQ9Y3I0 505 aaKnown RBP20.51■□□□□ 0.87
SPAST-203ENST00000615843 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
SPAST-203ENST00000615843 DR1Q01658 176 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
SPAST-203ENST00000615843 ANAPC5Q9UJX4 755 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.5■□□□□ 0.87
SPAST-203ENST00000615843 DHX40Q8IX18 779 aaKnown RBP20.5■□□□□ 0.87
SPAST-203ENST00000615843 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.5■□□□□ 0.87
SPAST-203ENST00000615843 ANGPTL2Q9UKU9 493 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 RPS6KA2Q15349 733 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 PCDHA4Q9UN74 947 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 ADORA1P30542 326 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 SNX1Q13596 522 aa20.5■□□□□ 0.87
SPAST-203ENST00000615843 MYO1FO00160 1098 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 SH3BP5O60239 455 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 YIPF3Q9GZM5 350 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 K7ENM7 598 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 NSFP46459 744 aaKnown RBP20.49■□□□□ 0.87
SPAST-203ENST00000615843 MYL7Q01449 175 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 TRIM42Q8IWZ5 723 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 NDST4Q9H3R1 872 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 ADGRG1Q9Y653 693 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 KIF1CO43896 1103 aaKnown RBP20.49■□□□□ 0.87
SPAST-203ENST00000615843 KRT19P08727 400 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 KCNA6P17658 529 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 ARMCX5Q6P1M9 558 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
SPAST-203ENST00000615843 CDC25AP30304 524 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 RASGRP4Q8TDF6 673 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 KIAA1024Q9UPX6 916 aa20.49■□□□□ 0.87
SPAST-203ENST00000615843 GMNCA6NCL1 334 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 STAM2O75886 525 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
SPAST-203ENST00000615843 KRT81Q14533 505 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.48■□□□□ 0.87
SPAST-203ENST00000615843 CCDC188H7C350 402 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 USP14P54578 494 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 POLA2Q14181 598 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 OTUD6AQ7L8S5 288 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 NLRP14Q86W24 1093 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 MAPK13O15264 365 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 MX2P20592 715 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 ZBTB17Q13105 803 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 RBM26Q5T8P6 1007 aaKnown RBP20.48■□□□□ 0.87
SPAST-203ENST00000615843 PARP9Q8IXQ6 854 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 KIF2CQ99661 725 aa20.48■□□□□ 0.87
SPAST-203ENST00000615843 STMN1P16949 149 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 SUDS3Q9H7L9 328 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms