RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 CHD9Q3L8U1 2897 aa12.4□□□□□ -0.42
COL4A1-205ENST00000615732 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 NMT2O60551 498 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 BMP3P12645 472 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 DEKP35659 375 aaKnown RBP12.39□□□□□ -0.43
COL4A1-205ENST00000615732 LIFRP42702 1097 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 FOSBP53539 338 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 CNTN2Q02246 1040 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 PDE4BQ07343 736 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 ACVR2BQ13705 512 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC144BQ3MJ40 725 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC174Q6PII3 467 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 MAMDC4Q6UXC1 1216 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 MSL3Q8N5Y2 521 aaKnown RBP12.39□□□□□ -0.43
COL4A1-205ENST00000615732 KLHDC9Q8NEP7 349 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 AGBL1Q96MI9 1066 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 TOX2Q96NM4 488 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL4A1-205ENST00000615732 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
COL4A1-205ENST00000615732 LY9Q9HBG7 655 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 ZSWIM5Q9P217 1185 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 TBX21Q9UL17 535 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
COL4A1-205ENST00000615732 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 MOXD2PA6NHM9 499 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 MBD3O95983 291 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 TIMP1P01033 207 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 ASGR1P07306 291 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 STAT2P52630 851 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 BEX3Q00994 111 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 KLHL40Q2TBA0 621 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 APOA5Q6Q788 366 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 KCTD1Q719H9 257 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 SGMS1Q86VZ5 419 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 IGDCC4Q8TDY8 1250 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 NUP133Q8WUM0 1156 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 MKL1Q969V6 931 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 TIFAQ96CG3 184 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 ACAD9Q9H845 621 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-205ENST00000615732 FBXO40Q9UH90 709 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
COL4A1-205ENST00000615732 ZNF536O15090 1300 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 FIBPO43427 364 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 ORC4O43929 436 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 ALAS1P13196 640 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
COL4A1-205ENST00000615732 SLC1A4P43007 532 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 NT5C2P49902 561 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 OAZ1P54368 228 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 KRT85P78386 507 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL4A1-205ENST00000615732 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 GLT1D1Q96MS3 346 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 KATNBL1Q9H079 304 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 ZNF576Q9H609 170 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL4A1-205ENST00000615732 LRRC37A2A6NM11 1700 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 ASTN1O14525 1302 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 TNKSO95271 1327 aa12.37□□□□□ -0.43
COL4A1-205ENST00000615732 MCM3APO60318 1980 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 GRXCR1A8MXD5 290 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 PBX2P40425 430 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 CDK7P50613 346 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 RTN1Q16799 776 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC96Q2M329 555 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 TJAP1Q5JTD0 557 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 GNASQ5JWF2 1037 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 RASIP1Q5U651 963 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 MFSD5Q6N075 450 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 FBXO16Q8IX29 292 aaPredicted RBP12.36□□□□□ -0.43
COL4A1-205ENST00000615732 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms