RNA–Protein interactions for RNA: ENST00000615729.4

UBXN8-207, Transcript of UBX domain protein 8, humanhuman

TSL 1 (best) BASIC

Gene UBXN8, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-207ENST00000615729 BMP3P12645 472 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 KCNA5P22460 613 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 COL19A1Q14993 1142 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 CAGE1Q8TC20 777 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 AFAP1L1Q8TED9 768 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
UBXN8-207ENST00000615729 MKNK2Q9HBH9 465 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 ZNF287Q9HBT7 754 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
UBXN8-207ENST00000615729 RNF146Q9NTX7 359 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 MTMR4Q9NYA4 1195 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
UBXN8-207ENST00000615729 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 COL11A1P12107 1806 aaPredicted RBP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 ABHD14A-ACY1A0A1B0GW23 586 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 A6NJR5 290 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 CXCL10P02778 98 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 WDR5P61964 334 aaKnown RBP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 RBL2Q08999 1139 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 PKN1Q16512 942 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 NBPF20Q3BBV1 942 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 GMCL1Q96IK5 515 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 TRERF1Q96PN7 1200 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 PRRX2Q99811 253 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 ZBED2Q9BTP6 218 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 WDR11Q9BZH6 1224 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 HOMER2Q9NSB8 354 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 CYP39A1Q9NYL5 469 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 ADD3Q9UEY8 706 aaKnown RBP11.91□□□□□ -0.5
UBXN8-207ENST00000615729 TNNQ9UQP3 1299 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 GBF1Q92538 1859 aa11.91□□□□□ -0.5
UBXN8-207ENST00000615729 RAD50Q92878 1312 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 LCHNA4D1U4 455 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 STK25O00506 426 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 TTLL1O95922 423 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 IL9P15248 144 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 STAT2P52630 851 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 ZSCAN25Q6NSZ9 544 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 CNKSR3Q6P9H4 555 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 SESTD1Q86VW0 696 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 FBXO16Q8IX29 292 aaPredicted RBP11.9□□□□□ -0.5
UBXN8-207ENST00000615729 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
UBXN8-207ENST00000615729 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
UBXN8-207ENST00000615729 PAG1Q9NWQ8 432 aa11.9□□□□□ -0.5
UBXN8-207ENST00000615729 LINC01553A4QN01 128 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 NCK2O43639 380 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 ATP5JP18859 108 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 ZP2Q05996 745 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 GPNMBQ14956 572 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 PTPROQ16827 1216 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 SLFN13Q68D06 897 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 BMP8AQ7Z5Y6 402 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 SPRED2Q7Z698 418 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 ADHFE1Q8IWW8 467 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
UBXN8-207ENST00000615729 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 CEP95Q96GE4 821 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 SAMD11Q96NU1 681 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
UBXN8-207ENST00000615729 CACNA1AO00555 2505 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 MYL3P08590 195 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
UBXN8-207ENST00000615729 SELPP16109 830 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 PTGS1P23219 599 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 TIGD5Q53EQ6 642 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
UBXN8-207ENST00000615729 FAM47CQ5HY64 1035 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 HFE2Q6ZVN8 426 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 EEPD1Q7L9B9 569 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 LRRC47Q8N1G4 583 aaKnown RBP11.88□□□□□ -0.51
UBXN8-207ENST00000615729 PABPC5Q96DU9 382 aaKnown RBP11.88□□□□□ -0.51
UBXN8-207ENST00000615729 STRBPQ96SI9 672 aaKnown RBP11.88□□□□□ -0.51
UBXN8-207ENST00000615729 HAUS7Q99871 368 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 C1orf115Q9H7X2 142 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 PPP4R2Q9NY27 417 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 ZNF318Q5VUA4 2279 aa11.88□□□□□ -0.51
UBXN8-207ENST00000615729 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
UBXN8-207ENST00000615729 ALAS1P13196 640 aa11.87□□□□□ -0.51
UBXN8-207ENST00000615729 PTPN5P54829 565 aa11.87□□□□□ -0.51
UBXN8-207ENST00000615729 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
UBXN8-207ENST00000615729 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
UBXN8-207ENST00000615729 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms