RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 GNL1P36915 607 aaPredicted RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 PRPF38AQ8NAV1 312 aaKnown RBP20.4■□□□□ 0.86
GABPB1-212ENST00000615671 CPSF3Q9UKF6 684 aaKnown RBP20.39■□□□□ 0.86
GABPB1-212ENST00000615671 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 IL17REQ8NFR9 667 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 USP28Q96RU2 1077 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 PIGSQ96S52 555 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 OAS2P29728 719 aaKnown RBP20.39■□□□□ 0.85
GABPB1-212ENST00000615671 PROSER3Q2NL68 480 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 DALRD3Q5D0E6 543 aaKnown RBP20.39■□□□□ 0.85
GABPB1-212ENST00000615671 PDZD8Q8NEN9 1154 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 GOLGA5Q8TBA6 731 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 ZBTB1Q9Y2K1 713 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 ARHGAP6O43182 974 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 TTLL1O95922 423 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 SUPT20HL1Q3ZLR7 823 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 ARHGAP24Q8N264 748 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 BABAM1Q9NWV8 329 aa20.39■□□□□ 0.85
GABPB1-212ENST00000615671 SLC7A3Q8WY07 619 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 LARSQ9P2J5 1176 aaKnown RBP20.38■□□□□ 0.85
GABPB1-212ENST00000615671 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.38■□□□□ 0.85
GABPB1-212ENST00000615671 IMPACTQ9P2X3 320 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 PRKAB2O43741 272 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 TRIM68Q6AZZ1 485 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 SLC10A4Q96EP9 437 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 DDIT3P35638 169 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 SPDL1Q96EA4 605 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 NLRP4Q96MN2 994 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 AMNQ9BXJ7 453 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 IQCB1Q15051 598 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 EXOC3L4Q17RC7 722 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 DDAH1O94760 285 aa20.38■□□□□ 0.85
GABPB1-212ENST00000615671 GARSP41250 739 aaKnown RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 FAM71BQ8TC56 605 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 H0YCG3 227 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 NDUFA8P51970 172 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 STAT2P52630 851 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 PTK2Q05397 1052 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 ADCY9O60503 1353 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 YEATS2Q9ULM3 1422 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 CYP2D7A0A087X1C5 515 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 HEXIM1O94992 359 aaKnown RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 LMNB1P20700 586 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 USP14P54578 494 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 MFAP3P55082 362 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 FAM26FQ5R3K3 315 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 NVLO15381 856 aaKnown RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 C21orf2O43822 256 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 TUBBP07437 444 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 ANXA13P27216 316 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 SKIV2LQ15477 1246 aaKnown RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 BAG5Q9UL15 447 aa20.37■□□□□ 0.85
GABPB1-212ENST00000615671 PCCAP05165 728 aaPredicted RBP20.37■□□□□ 0.85
GABPB1-212ENST00000615671 GOLGA8IPA6NC78 632 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 GOLGA8JA6NMD2 632 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 POLR2BP30876 1174 aaKnown RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 CACNB3P54284 484 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 DNAAF3Q8N9W5 541 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 CNOT6LQ96LI5 555 aaKnown RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 PIK3C2GO75747 1445 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 USP17L8P0C7I0 530 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 CLNS1AP54105 237 aaKnown RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 USP17L2Q6R6M4 530 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 RNF10Q8N5U6 811 aaKnown RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 CFAP36Q96G28 342 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 BAIAP2L1Q9UHR4 511 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 PDE1BQ01064 536 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 SMIM24O75264 130 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 CDO1Q16878 200 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 ZNF772Q68DY9 489 aaPredicted RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.36■□□□□ 0.85
GABPB1-212ENST00000615671 BRD3Q15059 726 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 EXT2Q93063 718 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 GCNAQ96QF7 691 aa20.36■□□□□ 0.85
GABPB1-212ENST00000615671 XPOTO43592 962 aaKnown RBP20.35■□□□□ 0.85
GABPB1-212ENST00000615671 ELF1P32519 619 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 TSNAXIP1Q2TAA8 658 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 NT5C1BQ96P26 610 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 FANCLQ9NW38 375 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 EHHADHQ08426 723 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 OR8K1Q8NGG5 319 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 RNF40O75150 1001 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 SCRN1Q12765 414 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 NFX1Q12986 1120 aaKnown RBP20.35■□□□□ 0.85
GABPB1-212ENST00000615671 ATP6V0A1Q93050 837 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 HEXIM2Q96MH2 286 aaKnown RBP20.35■□□□□ 0.85
GABPB1-212ENST00000615671 NCAPGQ9BPX3 1015 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 GRAMD1CQ8IYS0 662 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 RIPOR2Q9Y4F9 1068 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 SERPINB6P35237 376 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 EPHB1P54762 984 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 RCN2Q14257 317 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 TRIP13Q15645 432 aaPredicted RBP20.35■□□□□ 0.85
GABPB1-212ENST00000615671 OR6B2Q6IFH4 312 aa20.35■□□□□ 0.85
GABPB1-212ENST00000615671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 MRPL46Q9H2W6 279 aaKnown RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
GABPB1-212ENST00000615671 EIF2AK2P19525 551 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms