RNA–Protein interactions for RNA: ENST00000615575.4

FAM228B-210, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-210ENST00000615575 RANBP17Q9H2T7 1088 aaKnown RBP21.36■■□□□ 1.01
FAM228B-210ENST00000615575 SUGCTQ9HAC7 445 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 IL17RBQ9NRM6 502 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 ADD3Q9UEY8 706 aaKnown RBP21.36■■□□□ 1.01
FAM228B-210ENST00000615575 PRR33A8MZF0 331 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
FAM228B-210ENST00000615575 CALML3P27482 149 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.36■■□□□ 1.01
FAM228B-210ENST00000615575 DHX38Q92620 1227 aaKnown RBP21.36■■□□□ 1.01
FAM228B-210ENST00000615575 UIMC1Q96RL1 719 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 ZBED2Q9BTP6 218 aa21.36■■□□□ 1.01
FAM228B-210ENST00000615575 WDFY4Q6ZS81 3184 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 A6NJR5 290 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 ARIH2O95376 493 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 SSTR3P32745 418 aaPredicted RBP21.35■■□□□ 1.01
FAM228B-210ENST00000615575 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
FAM228B-210ENST00000615575 PTGISQ16647 500 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 FAM117BQ6P1L5 589 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 DDX19BQ9UMR2 479 aa21.35■■□□□ 1.01
FAM228B-210ENST00000615575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.35■■□□□ 1.01
FAM228B-210ENST00000615575 RAD50Q92878 1312 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.34■■□□□ 1.01
FAM228B-210ENST00000615575 LINC01553A4QN01 128 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 MRE11P49959 708 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 CTDSPL2Q05D32 466 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 PTPN11Q06124 597 aaPredicted RBP21.34■■□□□ 1.01
FAM228B-210ENST00000615575 PDE4DQ08499 809 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 LEXMQ3ZCV2 418 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 GDF6Q6KF10 455 aaPredicted RBP21.34■■□□□ 1.01
FAM228B-210ENST00000615575 CLEC4DQ8WXI8 215 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 NAPBQ9H115 298 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 LMCD1Q9NZU5 365 aa21.34■■□□□ 1.01
FAM228B-210ENST00000615575 FRMPD2Q68DX3 1309 aaPredicted RBP21.33■■□□□ 1.01
FAM228B-210ENST00000615575 TSPY2A6NKD2 308 aa21.33■■□□□ 1
FAM228B-210ENST00000615575 ERVK-21P61565 698 aa21.33■■□□□ 1
FAM228B-210ENST00000615575 BRDTQ58F21 947 aaPredicted RBP21.33■■□□□ 1
FAM228B-210ENST00000615575 LRRC8DQ7L1W4 858 aa21.33■■□□□ 1
FAM228B-210ENST00000615575 AFAP1L1Q8TED9 768 aa21.33■■□□□ 1
FAM228B-210ENST00000615575 FOXP2O15409 715 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 NBNO60934 754 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 GJB5O95377 273 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
FAM228B-210ENST00000615575 SYDE2Q5VT97 1194 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 CNKSR3Q6P9H4 555 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 SCFD2Q8WU76 684 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 TGS1Q96RS0 853 aaKnown RBP21.32■■□□□ 1
FAM228B-210ENST00000615575 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
FAM228B-210ENST00000615575 NKRFO15226 690 aaKnown RBP eCLIP21.31■■□□□ 1
FAM228B-210ENST00000615575 ZFYP08048 801 aaPredicted RBP21.31■■□□□ 1
FAM228B-210ENST00000615575 SLC3A2P08195 630 aaKnown RBP21.31■■□□□ 1
FAM228B-210ENST00000615575 TXNP10599 105 aaKnown RBP21.31■■□□□ 1
FAM228B-210ENST00000615575 SELPP16109 830 aa21.31■■□□□ 1
FAM228B-210ENST00000615575 EDNRBP24530 442 aa21.31■■□□□ 1
FAM228B-210ENST00000615575 PTCRAQ6ISU1 281 aaPredicted RBP21.31■■□□□ 1
FAM228B-210ENST00000615575 CCDC155Q8N6L0 562 aa21.31■■□□□ 1
FAM228B-210ENST00000615575 CAGE1Q8TC20 777 aa21.31■■□□□ 1
FAM228B-210ENST00000615575 LOC102724159A0A0B4J2E5 919 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 KPNA6O60684 536 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 PWP2Q15269 919 aaKnown RBP21.3■■□□□ 1
FAM228B-210ENST00000615575 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 DCAF4Q8WV16 495 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 AFG1LQ8WV93 481 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 KAT2BQ92831 832 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 RAD9AQ99638 391 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 C17orf80Q9BSJ5 609 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 GPCPD1Q9NPB8 672 aa21.3■■□□□ 1
FAM228B-210ENST00000615575 H3BQ06 376 aaPredicted RBP21.29■■□□□ 1
FAM228B-210ENST00000615575 CXCL10P02778 98 aa21.29■■□□□ 1
FAM228B-210ENST00000615575 MMP3P08254 477 aa21.29■■□□□ 1
FAM228B-210ENST00000615575 RPS6P62753 249 aaKnown RBP21.29■■□□□ 1
FAM228B-210ENST00000615575 NHLH1Q02575 133 aa21.29■■□□□ 1
FAM228B-210ENST00000615575 BTNL9Q6UXG8 535 aa21.29■■□□□ 1
FAM228B-210ENST00000615575 ANKS1AQ92625 1134 aa21.29■■□□□ 1
FAM228B-210ENST00000615575 RANBP6O60518 1105 aaKnown RBP21.28■■□□□ 1
FAM228B-210ENST00000615575 CKBP12277 381 aa21.28■■□□□ 1
FAM228B-210ENST00000615575 WNT8BQ93098 351 aa21.28■■□□□ 1
FAM228B-210ENST00000615575 GRXCR2A6NFK2 248 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 MS4A1P11836 297 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 NOVP48745 357 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 CSPP1Q1MSJ5 1256 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 PPP4R3BQ5MIZ7 849 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 FBXO22Q8NEZ5 403 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 FBXL18Q96ME1 805 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 CRBNQ96SW2 442 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 MICAL3Q7RTP6 2002 aa21.27■■□□□ 1
FAM228B-210ENST00000615575 ARHGAP1Q07960 439 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 RBL2Q08999 1139 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 MBTPS1Q14703 1052 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 LY6KQ17RY6 165 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 TRAF7Q6Q0C0 670 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
FAM228B-210ENST00000615575 CHST3Q7LGC8 479 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 SESTD1Q86VW0 696 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 GPATCH3Q96I76 525 aa21.26■□□□□ 0.99
FAM228B-210ENST00000615575 ZNF318Q5VUA4 2279 aa21.25■□□□□ 0.99
FAM228B-210ENST00000615575 ABHD14A-ACY1A0A1B0GW23 586 aa21.25■□□□□ 0.99
FAM228B-210ENST00000615575 ZMYM1Q5SVZ6 1142 aa21.25■□□□□ 0.99
FAM228B-210ENST00000615575 CCDC62Q6P9F0 684 aa21.25■□□□□ 0.99
FAM228B-210ENST00000615575 HDAC6Q9UBN7 1215 aa21.25■□□□□ 0.99
FAM228B-210ENST00000615575 ATG2AQ2TAZ0 1938 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms