RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 POLR2DO15514 142 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTAGE8P0CG41 777 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PIK3CAP42336 1068 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SARNPP82979 210 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZNF449Q6P9G9 518 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTAGE6Q86UF2 777 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTAGE4Q8IX94 777 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 NCAPGQ9BPX3 1015 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 KIF20BQ96Q89 1820 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CCDC66A2RUB6 948 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PRAMEF22A3QJZ6 481 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ZNF189O75820 626 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SCP2P22307 547 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PDE6CP51160 858 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CALCOCO2Q13137 446 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 INF2Q27J81 1249 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SNRNP48Q6IEG0 339 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 NELFBQ8WX92 580 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 CCDC51Q96ER9 411 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 KIAA1586Q9HCI6 787 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 MFAP3P55082 362 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 GABPAQ06546 454 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPP1R7Q15435 360 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 SPECC1Q5M775 1068 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 ARMCX2Q7L311 632 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 FAM151AQ8WW52 585 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 KCNJ14Q9UNX9 436 aa10.72□□□□□ -0.69
TNFRSF9-204ENST00000615230 PNPLA7Q6ZV29 1317 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 TECP42680 631 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 KCNJ6P48051 423 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 SFMBT2Q5VUG0 894 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 SPICE1Q8N0Z3 855 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 MMS19Q96T76 1030 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 TOPORSQ9NS56 1045 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 CTNND1O60716 968 aaKnown RBP10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 PPP6R2O75170 966 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 SPECC1LQ69YQ0 1117 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 GOLGA8HP0CJ92 632 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 CEP170P1Q96L14 293 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 TIPINQ9BVW5 301 aa10.71□□□□□ -0.69
TNFRSF9-204ENST00000615230 PLSCR1O15162 318 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 CHRNA5P30532 468 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF569Q5MCW4 686 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 PKNOX2Q96KN3 472 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 PIGSQ96S52 555 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 PIH1D3Q9NQM4 214 aaKnown RBP10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 IPO11Q9UI26 975 aaKnown RBP10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 ADALQ6DHV7 355 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 DYMQ7RTS9 669 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 TRIM50Q86XT4 487 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 CHST13Q8NET6 341 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 GDPD2Q9HCC8 539 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 MYOZ2Q9NPC6 264 aa10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF70Q9UC06 446 aaPredicted RBP10.71□□□□□ -0.7
TNFRSF9-204ENST00000615230 CELF2O95319 508 aaKnown RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 CELF1Q92879 486 aaKnown RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 NCOA5Q9HCD5 579 aaKnown RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 RIC8AQ9NPQ8 531 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 STK36Q9NRP7 1315 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 POLR3GO15318 223 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 DNA2P51530 1060 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM83BQ5T0W9 1011 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 MYSM1Q5VVJ2 828 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 TAF3Q5VWG9 929 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 SMC1BQ8NDV3 1235 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ADGRB2O60241 1585 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 DENND3A2RUS2 1198 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 C6orf163Q5TEZ5 329 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZNF280CQ8ND82 737 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 POMGNT1Q8WZA1 660 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 TRIM62Q9BVG3 475 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 FEZ2Q9UHY8 353 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ORC4O43929 436 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 GCLCP48506 637 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 C8orf34Q49A92 452 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 XRRA1Q6P2D8 792 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 NUDT18Q6ZVK8 323 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 CCT6BQ92526 530 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ZSWIM4Q9H7M6 989 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 RPF1Q9H9Y2 349 aaKnown RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 RNF146Q9NTX7 359 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 FAM184BQ9ULE4 1060 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 WDR64B1ANS9 1081 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 PRPSAP1Q14558 356 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 LEO1Q8WVC0 666 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 RUNDC3BQ96NL0 473 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 ANO3Q9BYT9 981 aa10.7□□□□□ -0.7
TNFRSF9-204ENST00000615230 IMPACTQ9P2X3 320 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms