RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ARHGEF16Q5VV41 709 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 FCHSD1Q86WN1 690 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 PCDH10Q9P2E7 1040 aa19.32■□□□□ 0.68
CBWD3-211ENST00000615061 GNEQ9Y223 722 aaKnown RBP19.32■□□□□ 0.68
CBWD3-211ENST00000615061 V9GY48 417 aaPredicted RBP19.32■□□□□ 0.68
CBWD3-211ENST00000615061 GCOM1H8Y6P7 765 aaPredicted RBP19.31■□□□□ 0.68
CBWD3-211ENST00000615061 C6orf222P0C671 652 aaPredicted RBP19.31■□□□□ 0.68
CBWD3-211ENST00000615061 POLR2MP0CAP2 368 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 PDIA3P30101 505 aaKnown RBP19.31■□□□□ 0.68
CBWD3-211ENST00000615061 LRRC26Q2I0M4 334 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 USP17L6PQ6QN14 398 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 HEATR3Q7Z4Q2 680 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 RNF180Q86T96 592 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 NCOA5Q9HCD5 579 aaKnown RBP19.31■□□□□ 0.68
CBWD3-211ENST00000615061 PDRG1Q9NUG6 133 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 LAMA3Q16787 3333 aa19.31■□□□□ 0.68
CBWD3-211ENST00000615061 EVCP57679 992 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 ANAPC15P60006 121 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 CCT2P78371 535 aaKnown RBP19.3■□□□□ 0.68
CBWD3-211ENST00000615061 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 TYW1BQ6NUM6 668 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 KLHDC9Q8NEP7 349 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 NID2Q14112 1375 aa19.3■□□□□ 0.68
CBWD3-211ENST00000615061 CTAGE5O15320 804 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 EVI5O60447 810 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 BEX3Q00994 111 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 IL31RAQ8NI17 732 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-211ENST00000615061 MPHOSPH6Q99547 160 aaKnown RBP19.29■□□□□ 0.68
CBWD3-211ENST00000615061 PDCD2LQ9BRP1 358 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 WDR11Q9BZH6 1224 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 MAP3K20Q9NYL2 800 aaKnown RBP19.29■□□□□ 0.68
CBWD3-211ENST00000615061 TRIOBPQ9H2D6 2365 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 MEIS2O14770 477 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 ARIH2O95376 493 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 NR3C2P08235 984 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 GJA9P57773 515 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 KCNA10Q16322 511 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 IQSEC1Q6DN90 963 aa19.29■□□□□ 0.68
CBWD3-211ENST00000615061 CCSAPQ6IQ19 270 aaPredicted RBP19.29■□□□□ 0.68
CBWD3-211ENST00000615061 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
CBWD3-211ENST00000615061 RBM47A0AV96 593 aaKnown RBP19.28■□□□□ 0.68
CBWD3-211ENST00000615061 H0YGN5 161 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 DYNC1LI2O43237 492 aaPredicted RBP19.28■□□□□ 0.68
CBWD3-211ENST00000615061 NTRK3Q16288 839 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 DUSP28Q4G0W2 176 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 SEPT14Q6ZU15 432 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 SAMD3Q8N6K7 520 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 COPS5Q92905 334 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 PHKBQ93100 1093 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 IWS1Q96ST2 819 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
CBWD3-211ENST00000615061 MYH7BA7E2Y1 1941 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 CCDC196A0A1B0GTZ2 297 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 B4DLN1 442 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
CBWD3-211ENST00000615061 MRPL12P52815 198 aaKnown RBP19.27■□□□□ 0.68
CBWD3-211ENST00000615061 STK3Q13188 491 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 PGM5Q15124 567 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 PPP2R5BQ15173 497 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 STXBP2Q15833 593 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 UBE2SQ16763 222 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 PRPF38BQ5VTL8 546 aaKnown RBP19.27■□□□□ 0.68
CBWD3-211ENST00000615061 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 PSTPIP2Q9H939 334 aa19.27■□□□□ 0.68
CBWD3-211ENST00000615061 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.67
CBWD3-211ENST00000615061 A0A1W2PQY0 241 aa19.27■□□□□ 0.67
CBWD3-211ENST00000615061 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.67
CBWD3-211ENST00000615061 ACLYP53396 1101 aa19.27■□□□□ 0.67
CBWD3-211ENST00000615061 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.67
CBWD3-211ENST00000615061 IL17RAQ96F46 866 aa19.27■□□□□ 0.67
CBWD3-211ENST00000615061 SPC25Q9HBM1 224 aa19.27■□□□□ 0.67
CBWD3-211ENST00000615061 RGS20O76081 388 aa19.26■□□□□ 0.67
CBWD3-211ENST00000615061 ASGR1P07306 291 aa19.26■□□□□ 0.67
CBWD3-211ENST00000615061 SLC39A5Q6ZMH5 540 aa19.26■□□□□ 0.67
CBWD3-211ENST00000615061 SCFD2Q8WU76 684 aa19.26■□□□□ 0.67
CBWD3-211ENST00000615061 STXBP3O00186 592 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 PIK3CDO00329 1044 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 EIF5BO60841 1220 aaKnown RBP19.25■□□□□ 0.67
CBWD3-211ENST00000615061 TXNP10599 105 aaKnown RBP19.25■□□□□ 0.67
CBWD3-211ENST00000615061 NAPAP54920 295 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 PKN1Q16512 942 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 VSIG10LQ86VR7 867 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 CUL5Q93034 780 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 ZNF274Q96GC6 653 aaPredicted RBP19.25■□□□□ 0.67
CBWD3-211ENST00000615061 TSEN34Q9BSV6 310 aaKnown RBP19.25■□□□□ 0.67
CBWD3-211ENST00000615061 AP5M1Q9H0R1 490 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
CBWD3-211ENST00000615061 LAMA2P24043 3122 aaKnown RBP19.25■□□□□ 0.67
CBWD3-211ENST00000615061 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
CBWD3-211ENST00000615061 AK2P54819 239 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 FSCN1Q16658 493 aaKnown RBP19.24■□□□□ 0.67
CBWD3-211ENST00000615061 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
CBWD3-211ENST00000615061 LY6KQ17RY6 165 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 CCDC62Q6P9F0 684 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms