RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SMCR8Q8TEV9 937 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 ARGLU1Q9NWB6 273 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 MRFAP1Q9Y605 127 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 SSC5DA1L4H1 1573 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 TCP10L2B9ZVM9 353 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 LMOD1P29536 600 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 CLCN6P51797 869 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ORC2Q13416 577 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 TRIM29Q14134 588 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 TMCO3Q6UWJ1 677 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ZNF341Q9BYN7 854 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 KCNF1Q9H3M0 494 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ADAM21Q9UKJ8 722 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ZBTB21Q9ULJ3 1066 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ATP8B1O43520 1251 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 MBD3O95983 291 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 MYL1P05976 194 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ASNSP08243 561 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 SCG2P13521 617 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 CALML3P27482 149 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 KRT85P78386 507 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 TCP10Q12799 353 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ACBD5Q5T8D3 534 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 DPY19L2Q6NUT2 758 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 KIAA1328Q86T90 577 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 EZH1Q92800 747 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 WDR18Q9BV38 432 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 ZCCHC17Q9NP64 241 aaKnown RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 POLR3EQ9NVU0 708 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 PNMA2Q9UL42 364 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 A0A0G2JMZ2 1700 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 GLTPD2A6NH11 291 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 CACNB3P54284 484 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 AKAP17AQ02040 695 aaKnown RBP9.83□□□□□ -0.84
VPS11-206ENST00000614944 MAP3K11Q16584 847 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 ZSCAN29Q8IWY8 852 aaPredicted RBP9.83□□□□□ -0.84
VPS11-206ENST00000614944 ELOA2Q8IYF1 753 aaPredicted RBP9.83□□□□□ -0.84
VPS11-206ENST00000614944 CCDC148Q8NFR7 591 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 CCDC12Q8WUD4 166 aaPredicted RBP9.83□□□□□ -0.84
VPS11-206ENST00000614944 SLC26A6Q9BXS9 759 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 GLT8D2Q9H1C3 349 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 RTEL1Q9NZ71 1219 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 TCHHQ07283 1943 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 CLRN2A0PK11 232 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 ANKRD65E5RJM6 399 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 YEATS4O95619 227 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 RANBP1P43487 201 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 TRAPPC10P48553 1259 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 KRT40Q6A162 431 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 TRIM7Q9C029 511 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 UNC45AQ9H3U1 944 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 IQCA1LA6NCM1 817 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 PLEKHA8P1O95397 391 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 ZNF24P17028 368 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 USP4Q13107 963 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 SUPT20HL1Q3ZLR7 823 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 NUP133Q8WUM0 1156 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 KAT2BQ92831 832 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 TNFRSF25Q93038 417 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 MYL10Q9BUA6 226 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 UBXN6Q9BZV1 441 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 TMEM39BQ9GZU3 492 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 DEFB129Q9H1M3 183 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 BARHL2Q9NY43 387 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 RCOR1Q9UKL0 485 aa9.83□□□□□ -0.84
VPS11-206ENST00000614944 KLRF2D3W0D1 207 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 M0R2N6 131 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 RTN3O95197 1032 aaPredicted RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 KIF4AO95239 1232 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 SLU7O95391 586 aaKnown RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 EEF2P13639 858 aaKnown RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 CLNS1AP54105 237 aaKnown RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 PRPF4BQ13523 1007 aaKnown RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 TSNAXIP1Q2TAA8 658 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 CEP135Q66GS9 1140 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 SAMD3Q8N6K7 520 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 LPAR1Q92633 364 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 SYAP1Q96A49 352 aaPredicted RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 C12orf42Q96LP6 360 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 STX8Q9UNK0 236 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 GJA8P48165 433 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 HIRAP54198 1017 aaPredicted RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 ZBED6P86452 979 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 LAMB3Q13751 1172 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 RRP1BQ14684 758 aaKnown RBP9.82□□□□□ -0.84
VPS11-206ENST00000614944 SAFBQ15424 915 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS11-206ENST00000614944 TRPM4Q8TD43 1214 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 KIAA1683Q9H0B3 1180 aa9.82□□□□□ -0.84
VPS11-206ENST00000614944 VPS37CA5D8V6 355 aaPredicted RBP9.81□□□□□ -0.84
VPS11-206ENST00000614944 BMP15O95972 392 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 FDX1P10109 184 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 PEX19P40855 299 aa9.81□□□□□ -0.84
VPS11-206ENST00000614944 CDR1P51861 262 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms